RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 EIF2B1Q14232 305 aaKnown RBP17.1■□□□□ 0.33
SNCA-203ENST00000394986 ALKBH6Q3KRA9 238 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 TEX30Q5JUR7 227 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 SLC35D3Q5M8T2 416 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 LPCAT4Q643R3 524 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 ZCCHC24Q8N2G6 241 aaKnown RBP17.1■□□□□ 0.33
SNCA-203ENST00000394986 WFDC11Q8NEX6 87 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 SLC25A40Q8TBP6 338 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 TRMT61AQ96FX7 289 aaKnown RBP17.1■□□□□ 0.33
SNCA-203ENST00000394986 AMELYQ99218 206 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 DOK1Q99704 481 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 ATF6BQ99941 703 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 OR2J1Q9GZK6 312 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 RTTNQ86VV8 2226 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 PRRC2AP48634 2157 aaKnown RBP17.09■□□□□ 0.33
SNCA-203ENST00000394986 H7C417 338 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 ICMTO60725 284 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 MRPL3P09001 348 aaKnown RBP17.09■□□□□ 0.33
SNCA-203ENST00000394986 PEX2P28328 305 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 PPP1CBP62140 327 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 TMEM255AQ5JRV8 349 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 AADACL4Q5VUY2 407 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 FAM81AQ8TBF8 368 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 SYNPRQ8TBG9 265 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 ST7LQ8TDW4 575 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 SLAMF6Q96DU3 332 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 TEAD3Q99594 435 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 VRK1Q99986 396 aaPredicted RBP17.09■□□□□ 0.33
SNCA-203ENST00000394986 PMF1-BGLAPU3KQ54 211 aa17.09■□□□□ 0.33
SNCA-203ENST00000394986 E9PQ18 207 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 F5H5K5 113 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 LY6HO94772 140 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 ZNF250P15622 560 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 ALDH3B1P43353 468 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 KRTAP27-1Q3LI81 207 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 GALNT4Q8N4A0 578 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 IPCEF1Q8WWN9 437 aaPredicted RBP17.08■□□□□ 0.32
SNCA-203ENST00000394986 UBE2FQ969M7 185 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 MARS2Q96GW9 593 aaKnown RBP17.08■□□□□ 0.32
SNCA-203ENST00000394986 SORCS2Q96PQ0 1159 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 ELOVL3Q9HB03 270 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 DYNLRB1Q9NP97 96 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 CENPMQ9NSP4 180 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 KLHDC2Q9Y2U9 406 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 STARD10Q9Y365 291 aa17.08■□□□□ 0.32
SNCA-203ENST00000394986 MAP1AP78559 2803 aaPredicted RBP17.07■□□□□ 0.32
SNCA-203ENST00000394986 A0A1W2PPW3 197 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 ADRA2AP08913 450 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 ACSM4P0C7M7 580 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 BMP4P12644 408 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 ANOS1P23352 680 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 HCCSP53701 268 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 KLF3P57682 345 aaPredicted RBP17.07■□□□□ 0.32
SNCA-203ENST00000394986 CDC42P60953 191 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 NXNL2Q5VZ03 156 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 ARL9Q6T311 187 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 MEPCEQ7L2J0 689 aaKnown RBP17.07■□□□□ 0.32
SNCA-203ENST00000394986 NAA40Q86UY6 237 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 HRASLS5Q96KN8 279 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 COPS4Q9BT78 406 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 ABHD6Q9BV23 337 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 TPK1Q9H3S4 243 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 DDX28Q9NUL7 540 aaKnown RBP17.07■□□□□ 0.32
SNCA-203ENST00000394986 TBCCD1Q9NVR7 557 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 DNAJC27Q9NZQ0 273 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 TAAR3PQ9P1P4 343 aa17.07■□□□□ 0.32
SNCA-203ENST00000394986 IGLV3-9A0A075B6K5 115 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 PPOXP50336 477 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 ECH1Q13011 328 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 ZNF718Q3SXZ3 478 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 LCN1P1Q5VSP4 162 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 UNQ6126/PRO20091Q6UXV3 157 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 SHFQ7M4L6 423 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 KLF14Q8TD94 323 aaPredicted RBP17.06■□□□□ 0.32
SNCA-203ENST00000394986 GTF3AQ92664 365 aaKnown RBP17.06■□□□□ 0.32
SNCA-203ENST00000394986 DCLRE1CQ96SD1 692 aaKnown RBP17.06■□□□□ 0.32
SNCA-203ENST00000394986 IMPAD1Q9NX62 359 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 NKX1-2Q9UD57 310 aaPredicted RBP17.06■□□□□ 0.32
SNCA-203ENST00000394986 AASSQ9UDR5 926 aa17.06■□□□□ 0.32
SNCA-203ENST00000394986 M0R135 149 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 M0R233 179 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 DLGAP1O14490 977 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 GCH1P30793 250 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 EVX1P49640 407 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 PRKXP51817 358 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 SPNS3Q6ZMD2 512 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 OR8J1Q8NGP2 316 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 OTOSQ8NHW6 89 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 ZNF799Q96GE5 643 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 PTTG3PQ9NZH4 202 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 H2AFY2Q9P0M6 372 aaPredicted RBP17.05■□□□□ 0.32
SNCA-203ENST00000394986 VPS13CQ709C8 3753 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 ARID1AO14497 2285 aa17.05■□□□□ 0.32
SNCA-203ENST00000394986 C5orf63A6NC05 138 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 ZNF878C9JN71 531 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 SSX4O60224 188 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 LYNP07948 512 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 NAT2P11245 290 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 RGS6P49758 472 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 NUDT6P53370 316 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms