RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 EBPQ15125 230 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 NKPD1Q17RQ9 610 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 C1orf140Q5VVS0 124 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 C11orf87Q6NUJ2 197 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 PAPD4Q6PIY7 484 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 LRFN4Q6PJG9 635 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 MOB3CQ70IA8 216 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 C9orf40Q8IXQ3 194 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 OR4D6Q8NGJ1 314 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 G6PC2Q9NQR9 355 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 MMACHCQ9Y4U1 282 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 PI4KAP42356 2102 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 IGKV3D-11A0A0A0MRZ8 115 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 LOC107986453A0A1B0GWG9 222 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 LOC390937A0A1W2PQ73 354 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 A0A1W2PQD3 144 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 KANTRA0A1W2PQU2 76 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 MEGF11A6BM72 1044 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 OR14I1A6ND48 311 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 HLA-AP01891 365 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 SLC25A4P12235 298 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 POLR2HP52434 150 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF345Q14585 488 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 LRRC37A5PQ49AS3 106 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 C1orf100Q5SVJ3 147 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 LYPD6Q86Y78 171 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 ACBD4Q8NC06 268 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 SEC22AQ96IW7 307 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF75AQ96N20 296 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 TBL1XR1Q9BZK7 514 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 OR11A1Q9GZK7 315 aa16.41■□□□□ 0.22
PCDHA1-202ENST00000394633 LOC101059948A0A1B0GTJ6 334 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 RNF222A6NCQ9 220 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 BCL2L11O43521 198 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 ICAM2P13598 275 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 FASLGP48023 281 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 ARRB1P49407 418 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 BLKP51451 505 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 LUMP51884 338 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 LPCAT3Q6P1A2 487 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 CD163Q86VB7 1156 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF584Q8IVC4 421 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 MRGPRFQ96AM1 343 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 ZBTB8AQ96BR9 441 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 VRK1Q99986 396 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 PDCD10Q9BUL8 212 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 DNTTIP1Q9H147 329 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 PCED1AQ9H1Q7 454 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 PDE7BQ9NP56 450 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 OR52A1Q9UKL2 312 aa16.4■□□□□ 0.22
PCDHA1-202ENST00000394633 A0A1B0GW55 424 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DNASE2O00115 360 aaPredicted RBP16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 OR2F2O95006 317 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DUX4L2P0CJ85 424 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DUX4L3P0CJ86 424 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DUX4L4P0CJ87 422 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DUX4L5P0CJ88 424 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DUX4L6P0CJ89 424 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DUX4L7P0CJ90 424 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 HLA-DOBP13765 273 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 ZBTB25P24278 435 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 GLO1Q04760 184 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 OR2F1Q13607 317 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 TAF13Q15543 124 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 BEX5Q5H9J7 111 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 TTLL10Q6ZVT0 673 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 AQP3Q92482 292 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 NKD1Q969G9 470 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 COMMD9Q9P000 198 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 DUX4Q9UBX2 424 aa16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 GDF2Q9UK05 429 aaPredicted RBP16.39■□□□□ 0.22
PCDHA1-202ENST00000394633 TMEM200CA6NKL6 621 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 A8MVM7 634 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 DISC1C4P0D8 188 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 ISG15P05161 165 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 NME1P15531 152 aaKnown RBP16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 STARP49675 285 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 PLCXD2Q0VAA5 305 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 ZNF260Q3ZCT1 412 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 LIN54Q6MZP7 749 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 C3orf33Q6P1S2 294 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 SLC25A42Q86VD7 318 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 KDM8Q8N371 416 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 PMEPA1Q969W9 287 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 PTX4Q96A99 478 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 ARPC5LQ9BPX5 153 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 CUTCQ9NTM9 273 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 HRH3Q9Y5N1 445 aa16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 PHF3Q92576 2039 aaKnown RBP16.39■□□□□ 0.21
PCDHA1-202ENST00000394633 NUDT21O43809 227 aaKnown RBP16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 WDPCPO95876 746 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 IL11P20809 199 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 CRABP1P29762 137 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 ATP1B3P54709 279 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 DCAF7P61962 342 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 MEF2DQ14814 521 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 ELOCQ15369 112 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 ELAVL1Q15717 326 aaKnown RBP16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 PHF19Q5T6S3 580 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 ELP2Q6IA86 826 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms