RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 SH2D1BO14796 132 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 F7P08709 466 aaPredicted RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 LIMS3P0CW19 117 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 LIMS4P0CW20 117 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 DPY19L2P2Q6ZN68 376 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 KIR2DS3Q14952 304 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 MRPL2Q5T653 305 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 FUBP1Q96AE4 644 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 IGHEP01854 428 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 CSF2RAP15509 400 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 TEAD2Q15562 447 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 IGDCC3Q8IVU1 814 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 BAP18Q8IXM2 172 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 SCCPDHQ8NBX0 429 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 ADOQ96SZ5 270 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 OBP2AQ9NY56 170 aa12.33□□□□□ -0.43
USP49-203ENST00000394253 TRAV36DV7A0A075B6V5 113 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 OR2T8A6NH00 312 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 PEX10O60683 326 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 HYAL4Q2M3T9 481 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 SLC16A12Q6ZSM3 486 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 GALNT16Q8N428 558 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 MRGPRX2Q96LB1 330 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 SLC30A3Q99726 388 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 TMEM231Q9H6L2 316 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 DIP2CQ9Y2E4 1556 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.44
USP49-203ENST00000394253 TMEM127O75204 238 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 PNRC1Q12796 327 aaPredicted RBP12.33□□□□□ -0.44
USP49-203ENST00000394253 CD226Q15762 336 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 MBOAT2Q6ZWT7 520 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 OR51H1Q8NH63 302 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 CHST11Q9NPF2 352 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 PPP1R11O60927 126 aaPredicted RBP12.33□□□□□ -0.44
USP49-203ENST00000394253 CD1BP29016 333 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 RAB32Q13637 225 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 ABI3BPQ7Z7G0 1075 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 ARRDC2Q8TBH0 407 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 ERGIC1Q969X5 290 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 COL25A1Q9BXS0 654 aaPredicted RBP12.33□□□□□ -0.44
USP49-203ENST00000394253 CSF2RBP32927 897 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 MIDNQ504T8 468 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 PEBP4Q96S96 227 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 ASIC5Q9NY37 505 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 CLEC18AA5D8T8 446 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 OOEPA6NGQ2 149 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 LYZL6O75951 148 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 HIST1H1CP16403 213 aaKnown RBP12.33□□□□□ -0.44
USP49-203ENST00000394253 FKBP2P26885 142 aaKnown RBP12.33□□□□□ -0.44
USP49-203ENST00000394253 CXCL9Q07325 125 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 RANBP10Q6VN20 620 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 Q6ZVL8 140 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 CLEC18CQ8NCF0 446 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 ACVR1CQ8NER5 493 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 OR14A16Q8NHC5 309 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 EDARADDQ8WWZ3 215 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 TAAR6Q96RI8 345 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 GDF1P27539 372 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 SPINT3P49223 89 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 TMEM37Q8WXS4 190 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 FAM210BQ96KR6 192 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 FYTTD1Q96QD9 318 aaKnown RBP12.33□□□□□ -0.44
USP49-203ENST00000394253 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
USP49-203ENST00000394253 ZFAND5O76080 213 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 BTF3P20290 206 aaKnown RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 CLDN12P56749 244 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 C12orf54Q6X4T0 127 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 OR1N2Q8NGR9 330 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 KCNE4Q8WWG9 221 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 TEAD3Q99594 435 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 GPR87Q9BY21 358 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 DUXBA0A1W2PPF3 345 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 PRSS1P07477 247 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 C21orf58P58505 322 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 SNRPGP62308 76 aaKnown RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
USP49-203ENST00000394253 DHODHQ02127 395 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 ZNF141Q15928 474 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 CTU2Q2VPK5 515 aaKnown RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 MAML2Q8IZL2 1156 aaPredicted RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 OR5D18Q8NGL1 313 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 OLIG1Q8TAK6 271 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 ELOVL1Q9BW60 279 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 CORINQ9Y5Q5 1042 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 ALOX5APP20292 161 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 FPGSQ05932 587 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 OLIG2Q13516 323 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 OR2A2Q6IF42 318 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 TMEM116Q8NCL8 245 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 DHRS4Q9BTZ2 278 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 ADAT1Q9BUB4 502 aaKnown RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 PSORS1C1Q9UIG5 152 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms