RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CNN2Q99439 309 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BLQ99880 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 SLC25A31Q9H0C2 315 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 MAGEH1Q9H213 219 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM38AQ9H6F2 299 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 NEUROD4Q9HD90 331 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 NAGKQ9UJ70 344 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TCFL5Q9UL49 500 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ZFP30Q9Y2G7 519 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 F5P12259 2224 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 H3BQ15 152 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 M0QZQ0 153 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 DVL2O14641 736 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 INSIG1O15503 277 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SGSHP51688 502 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SNRPD1P62314 119 aaKnown RBP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 DLK1P80370 383 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 FOXK2Q01167 660 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 GUCA2AQ02747 115 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TLE3Q04726 772 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 GNMTQ14749 295 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ELOCQ15369 112 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF774Q6NX45 483 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 BTNL3Q6UXE8 466 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SCD5Q86SK9 330 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 KLHDC9Q8NEP7 349 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 FNDC9Q8TBE3 224 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ARRDC2Q8TBH0 407 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ADAMTS15Q8TE58 950 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 GPX8Q8TED1 209 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TNFRSF14Q92956 283 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 IGSF8Q969P0 613 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SDSLQ96GA7 329 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SLC6A18Q96N87 628 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SIRT3Q9NTG7 399 aaPredicted RBP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF586Q9NXT0 402 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 STRAPQ9Y3F4 350 aaKnown RBP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TGIF2-C20orf24A0A0A6YYL0 155 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ZC3H12DA2A288 527 aaKnown RBP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 C17orf105B2RV13 164 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM238C9JI98 176 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 FTCDNL1E5RQL4 147 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 H7BYZ3 331 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 FRS3O43559 492 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 DOK2O60496 412 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 BPNT1O95861 308 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TK1P04183 234 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 RPL12P30050 165 aaKnown RBP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 GRPRP30550 384 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 CDKN1BP46527 198 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 CSRP3P50461 194 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 NOVA1P51513 510 aaKnown RBP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 LBX1P52954 281 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 LIM2P55344 173 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 GPNMBQ14956 572 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 PIP5KL1Q5T9C9 394 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF343Q6P1L6 599 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TAS1R1Q7RTX1 841 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 FAM129CQ86XR2 697 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 KLHDC1Q8N7A1 406 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ARIH2OSQ8N7S6 290 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SLC38A5Q8WUX1 472 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 CXorf40BQ96DE9 158 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 REEP6Q96HR9 211 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 PGAM5Q96HS1 289 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SHDQ96IW2 340 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ADGRG7Q96K78 797 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 WDR13Q9H1Z4 485 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ZMAT3Q9HA38 289 aaKnown RBP6.94□□□□□ -1.3
VTI1A-201ENST00000393077 LPAR2Q9HBW0 351 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 HSF4Q9ULV5 492 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 FOXJ3Q9UPW0 622 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF281Q9Y2X9 895 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TIMM10BQ9Y5J6 103 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 GJB3O75712 270 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SLC16A8O95907 504 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 MT-CO2P00403 227 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 HPRT1P00492 218 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 IFNA1P01562 189 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ITGB2P05107 769 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 CRHP06850 196 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 CD14P08571 375 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SLC35G6P0C7Q6 338 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 CLDN6P56747 220 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 UBE2G2P60604 165 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 DOCK1Q14185 1865 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM183AQ8IXX5 376 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 OR5AK2Q8NH90 309 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF417Q8TAU3 575 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 MRGPRDQ8TDS7 321 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 OR8B4Q96RC9 309 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 DIRC2Q96SL1 478 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 ADAP2Q9NPF8 381 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 SEMA5BQ9P283 1151 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 IL36AQ9UHA7 158 aa6.94□□□□□ -1.3
VTI1A-201ENST00000393077 COCHO43405 550 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 CA11O75493 328 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 CSTAP01040 98 aa6.93□□□□□ -1.3
VTI1A-201ENST00000393077 KNG1P01042 644 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms