RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 OR8D1Q8WZ84 308 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 MS4A6EQ96DS6 147 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 SLC41A2Q96JW4 573 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 AQP10Q96PS8 301 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 SLC5A7Q9GZV3 580 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 SPACA1Q9HBV2 294 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 STARD10Q9Y365 291 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 EML5Q05BV3 1969 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 GLCEO94923 617 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 MAP3K8P41279 467 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 RAB4BP61018 213 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 LSM6P62312 80 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ADAM8P78325 824 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 PLAURQ03405 335 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 HYAL1Q12794 435 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZIC1Q15915 447 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 TANGO2Q6ICL3 276 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ABHD17CQ6PCB6 329 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 TDHQ8IZJ6 230 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF619Q8N2I2 560 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF676Q8N7Q3 588 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 UBAC2Q8NBM4 344 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 OR2L2Q8NH16 312 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 FAM174AQ8TBP5 190 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ROBO4Q8WZ75 1007 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 TGM7Q96PF1 710 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 NKX3-1Q99801 234 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ULBP3Q9BZM4 244 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 RAB33BQ9H082 229 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 PCBD2Q9H0N5 130 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 DUSP15Q9H1R2 295 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 FBXO34Q9NWN3 711 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 OR5AC2Q9NZP5 309 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 FLRT3Q9NZU0 649 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 DOK5Q9P104 306 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF346Q9UL40 294 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ENTPD2Q9Y5L3 495 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF780BQ9Y6R6 833 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 A0A0B4J2E0 115 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 A0A1B0GX12 115 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 PCCBP05166 539 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 RSU1Q15404 277 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 RPL7L1Q6DKI1 246 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 PRSS54Q6PEW0 395 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 OR1J1Q8NGS3 322 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 LINC00615Q96LM1 132 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 SCRT1Q9BWW7 348 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZMAT3Q9HA38 289 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 TAF9BQ9HBM6 251 aa13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-201ENST00000389386 NUP210LQ5VU65 1888 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 IGKV1-8A0A0C4DH67 115 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 A0A1B0GWA3 101 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 PMP2P02689 132 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 AKR1C4P17516 323 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 MPZP25189 248 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 ARRB1P49407 418 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 EIF2B1Q14232 305 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 RHEBQ15382 184 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 ACTBL2Q562R1 376 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 TGIF2LXQ8IUE1 241 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 C19orf47Q8N9M1 422 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 GPBAR1Q8TDU6 330 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 TCTN2Q96GX1 697 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 ADAD1Q96M93 576 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 SOX7Q9BT81 388 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 ALG12Q9BV10 488 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 DOCK8Q8NF50 2099 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 DNAJB6O75190 326 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 PAX1P15863 534 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 P2RY2P41231 377 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 SLC26A5P58743 744 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 ODF4Q2M2E3 257 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 RNASE10Q5GAN6 216 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 Q6ZRG5 221 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 TP53TG5Q9Y2B4 290 aa13.18□□□□□ -0.3
VPS9D1-201ENST00000389386 IGLON5A6NGN9 336 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 HSD11B2P80365 405 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 DMWDQ09019 674 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 SLC16A9Q7RTY1 509 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF584Q8IVC4 421 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF563Q8TA94 476 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 RASD2Q96D21 266 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 COMMD4Q9H0A8 199 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 GDF2Q9UK05 429 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 ZDHHC8Q9ULC8 765 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 HDGFL3Q9Y3E1 203 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 EDDM13A0A1B0GTR0 161 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 SEC14L6B5MCN3 397 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 LDB3O75112 727 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms