RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 UPK3BL1B0FP48 263 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 UPK3BL2E5RIL1 263 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 PRAMEF4O60810 478 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 LGALS2P05162 132 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 ACHEP22303 614 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 INCA1Q0VD86 236 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 OR8B3Q8NGG8 313 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 GPR62Q9BZJ7 368 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 NAA50Q9GZZ1 169 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 UQCC1Q9NVA1 299 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 MDC1Q14676 2089 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 USP31Q70CQ4 1352 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SCO2O43819 266 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 SRP14P37108 136 aaKnown RBP8.04□□□□□ -1.12
LIG3-202ENST00000378526 NRLP54845 237 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 OTOP2Q7RTS6 562 aa8.04□□□□□ -1.12
LIG3-202ENST00000378526 FUBP3Q96I24 572 aaKnown RBP eCLIP8.04□□□□□ -1.12
LIG3-202ENST00000378526 CA12O43570 354 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 DUS4LO95620 317 aaKnown RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 TAL1P17542 331 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 RIGQ13278 110 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MFSD12Q6NUT3 480 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ASCL4Q6XD76 172 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 LPAR5Q9H1C0 372 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ADGRL4Q9HBW9 690 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 PSENENQ9NZ42 101 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 CYR61O00622 381 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MBPP02686 304 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 SLC6A1P30531 599 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ZNF124Q15973 351 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ECM1Q16610 540 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 RGMBQ6NW40 437 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 WDR89Q96FK6 387 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 OR5M11Q96RB7 305 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ALKBH7Q9BT30 221 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 ST6GAL1P15907 406 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 EVX1P49640 407 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 HLA-DRB3P79483 266 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 RELQ04864 619 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 ZNF385CQ66K41 422 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 USP53Q70EK8 1073 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 OR52B6Q8NGF0 335 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 DNAJA3Q96EY1 480 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 SIGLEC10Q96LC7 697 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MSRAQ9UJ68 235 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MYO16Q9Y6X6 1858 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 SERPINE3A8MV23 424 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 UBE2Q2LH0YL09 131 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ZNF253O75346 499 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ZNF737O75373 536 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 TMIGD3P0DMS9 266 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 ACP5P13686 325 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 XCR1P46094 333 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 PNLIPRP2P54317 469 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 INHBCP55103 352 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 TMEM128Q5BJH2 165 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MARCH8Q5T0T0 291 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 SUSD1Q6UWL2 747 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 OR8G5Q8NG78 346 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 JAM3Q9BX67 310 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 GIMAP2Q9UG22 337 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MSCO60682 206 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 PIAS2O75928 621 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 PGA3P0DJD8 388 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 NHSL2Q5HYW2 709 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 PIGCQ92535 297 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 ZNF689Q96CS4 500 aaPredicted RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 TBX21Q9UL17 535 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 KCNK7Q9Y2U2 307 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 CLDN16Q9Y5I7 305 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MELTFP08582 738 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 TBXA2RP21731 343 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 RPS26P62854 115 aaKnown RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 PTPRCAPQ14761 206 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MOB3CQ70IA8 216 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 CBLL1Q75N03 491 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 LINC00518Q8N0U6 118 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MYO3AQ8NEV4 1616 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 OR11L1Q8NGX0 322 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 OR2T6Q8NHC8 308 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 NIPSNAP1Q9BPW8 284 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 FOXJ3Q9UPW0 622 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 A0A087WV62 115 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 LINC00862A6NCI5 91 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 RBFOX3A6NFN3 312 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 OR4C46A6NHA9 309 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 LYZL6O75951 148 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
LIG3-202ENST00000378526 DNLZQ5SXM8 178 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 CALHM1Q8IU99 346 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 OR5M9Q8NGP3 310 aa8.03□□□□□ -1.12
LIG3-202ENST00000378526 MYO5AQ9Y4I1 1855 aaKnown RBP8.02□□□□□ -1.12
LIG3-202ENST00000378526 SMIM13P0DJ93 91 aa8.02□□□□□ -1.12
LIG3-202ENST00000378526 CD79AP11912 226 aa8.02□□□□□ -1.12
LIG3-202ENST00000378526 TBPL1P62380 186 aa8.02□□□□□ -1.12
LIG3-202ENST00000378526 IL17AQ16552 155 aa8.02□□□□□ -1.12
LIG3-202ENST00000378526 ENTPD8Q5MY95 495 aa8.02□□□□□ -1.12
LIG3-202ENST00000378526 MYPOPQ86VE0 399 aaPredicted RBP8.02□□□□□ -1.12
LIG3-202ENST00000378526 PCED1BQ96HM7 432 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms