RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 KIR3DX1Q9H7L2 352 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 HINT3Q9NQE9 182 aaKnown RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 HS3ST1O14792 307 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 CTNSO60931 367 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 HNF1AP20823 631 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 RPL27P61353 136 aaKnown RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM74A1Q5RGS3 127 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 MS4A6EQ96DS6 147 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 DHRS9Q9BPW9 319 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 PLA2G3Q9NZ20 509 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 TREM2Q9NZC2 230 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 PROCRQ9UNN8 238 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 LRRC30A6NM36 301 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 HPNP05981 417 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SNTB1Q13884 538 aaKnown RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF239Q16600 458 aaKnown RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 PRTGQ2VWP7 1150 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 WDR88Q6ZMY6 472 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 ZFP62Q8NB50 900 aaPredicted RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF680Q8NEM1 530 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 MAP6Q96JE9 813 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SEMA4CQ9C0C4 833 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 NRSN2Q9GZP1 204 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 HTN1P15515 57 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SNRPNP63162 240 aaKnown RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SELENBP1Q13228 472 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 OR8G2PQ6IF36 304 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM199XQ6PEV8 388 aaPredicted RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 TMEM88Q6PEY1 159 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 TEX261Q6UWH6 196 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 GABRG1Q8N1C3 465 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 OR51A4Q8NGJ6 313 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 U3KQ87 197 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 TSPAN12O95859 305 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 DHRS4L2Q6PKH6 230 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM26EQ8N5C1 309 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 BCORP1Q8N888 145 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 OR4N2Q8NGD1 307 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 OR51A2Q8NGJ7 313 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 OR1E3Q8WZA6 343 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC23A1Q9UHI7 598 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A1W2PPH5 198 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF891A8MT65 544 aaPredicted RBP10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF724A8MTY0 619 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 ACOT7LQ6ZUV0 252 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 SH2D5Q6ZV89 423 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 TCTE3Q8IZS6 198 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 ZDHHC5Q9C0B5 715 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 EXO1Q9UQ84 846 aaKnown RBP10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A1W2PR48 441 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 OR5H15A6NDH6 313 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 OR5H14A6NHG9 310 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 OR5H1A6NKK0 313 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 TRHRP34981 398 aaPredicted RBP10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 OR2B8PP59922 312 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 GRB2P62993 217 aaKnown RBP10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM58AQ8N1B3 248 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 TMED6Q8WW62 240 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 C20orf202A1L168 122 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 F6UZH7 168 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 EVX1P49640 407 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 MLF1P58340 268 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 DOC2BQ14184 412 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 INTS12Q96CB8 462 aaKnown RBP10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF346Q9UL40 294 aaKnown RBP10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 MT-CO3P00414 261 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 DUSP1P28562 367 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 EMDP50402 254 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 ANKRD16Q6P6B7 361 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 ZPBPQ9BS86 351 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 PDFQ9HBH1 243 aa10.92□□□□□ -0.66
PCDHA9-201ENST00000378122 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 PCBP4P57723 403 aaKnown RBP10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 YPEL5P62699 121 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM26DQ5JW98 314 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 WDR31Q8NA23 367 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 OR51E1Q8TCB6 317 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 SRRQ9GZT4 340 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 ONECUT1Q9UBC0 465 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 MMP17Q9ULZ9 603 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 NPFFR2Q9Y5X5 522 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 CD80P33681 288 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 CTF1Q16619 201 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 CORO6Q6QEF8 472 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 FBXL14Q8N1E6 418 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 LFNGQ8NES3 379 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 ARV1Q9H2C2 271 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 ZCCHC4Q9H5U6 513 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A087WV62 115 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 LOC107986453A0A1B0GWG9 222 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 A8MVM7 634 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 MBTPS2O43462 519 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 DFFBO76075 338 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 ALOX5APP20292 161 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 HTRA4P83105 476 aaPredicted RBP10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 TAF9Q16594 264 aa10.91□□□□□ -0.66
PCDHA9-201ENST00000378122 OTPQ5XKR4 325 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms