RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SPACA1Q9HBV2 294 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 GCM1Q9NP62 436 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 KCNG2Q9UJ96 466 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 FLVCR2Q9UPI3 526 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 MED16Q9Y2X0 877 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PCYT1BQ9Y5K3 369 aaPredicted RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 C17orf112F2Z3M2 114 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 H0YIG0 161 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ARPC3O15145 178 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 MT-ND4LP03901 98 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 GSTP1P09211 210 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 CTXN2P0C2S0 81 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 RPS2P15880 293 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 SERPINF1P36955 418 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 HSF1Q00613 529 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 IKZF1Q13422 519 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 FAM53BQ14153 422 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 GLDNQ6ZMI3 551 aaPredicted RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 GPR32P1Q8NGA4 272 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 OR9K2Q8NGE7 335 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 NT5CQ8TCD5 201 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ZNF764Q96H86 408 aaPredicted RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 SIGLEC11Q96RL6 698 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SLC17A5Q9NRA2 495 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SLC5A6Q9Y289 635 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 PRSS37A4D1T9 235 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 S100A8P05109 93 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 MSR1P21757 451 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 DCTDP32321 178 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SSR4P51571 173 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SLC25A35Q3KQZ1 300 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 PAN3Q58A45 887 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 FAM27D1Q5T7N8 215 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SIGIRRQ6IA17 410 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 CA13Q8N1Q1 262 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 TMED6Q8WW62 240 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ST8SIA2Q92186 375 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SLAMF6Q96DU3 332 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 MRPL38Q96DV4 380 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 PIGQQ9BRB3 760 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 AUNIPQ9H7T9 357 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 GPATCH2Q9NW75 528 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 GHRLQ9UBU3 117 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ACAD8Q9UKU7 415 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 LHX6Q9UPM6 363 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SIGLEC7Q9Y286 467 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 STRAPQ9Y3F4 350 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 MEIKINA0A087WXM9 373 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 BCAT2O15382 392 aaPredicted RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 ALOX5APP20292 161 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 BCKDHBP21953 392 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 NFYBP25208 207 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 DUSP1P28562 367 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 LAP3P28838 519 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ELFN2Q5R3F8 820 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 THEM4Q5T1C6 240 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ATPAF1Q5TC12 328 aaPredicted RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 LYSMD4Q5XG99 296 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ADAM5Q6NVV9 412 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 LYG2Q86SG7 212 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SIRT6Q8N6T7 355 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 EXD3Q8N9H8 876 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 DTWD2Q8NBA8 298 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 OR4C16Q8NGL9 310 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 OR4Q3Q8NH05 313 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 OR52N5Q8NH56 324 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 C16orf52Q8NHV5 167 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 C14orf79Q96F83 325 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 DERL3Q96Q80 235 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SAMD10Q9BYL1 202 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 SLAMF7Q9NQ25 335 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 PRDM7Q9NQW5 492 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 PURGQ9UJV8 347 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 EXOGQ9Y2C4 368 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 MTCH2Q9Y6C9 303 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 R4GMQ9 66 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 POM121BA6NF01 834 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 OR6C76A6NM76 312 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 HSBP1L1C9JCN9 74 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 H3BQ06 376 aaPredicted RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 RGS13O14921 159 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 AQP8O94778 261 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 NDUFB6O95139 128 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ADRA2CP18825 462 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 KITLGP21583 273 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 EEF1A2Q05639 463 aaKnown RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 RUNX2Q13950 521 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 CLINT1Q14677 625 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 AGERQ15109 404 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 TOMM34Q15785 309 aaPredicted RBP7.62□□□□□ -1.19
VPS36-201ENST00000378060 ZFP82Q8N141 532 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ARHGEF39Q8N4T4 335 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 TMEM229BQ8NBD8 167 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 LIPHQ8WWY8 451 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 ERVMER34-1Q9H9K5 563 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 KLK11Q9UBX7 282 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 TRAPPC2LQ9UL33 140 aa7.62□□□□□ -1.19
VPS36-201ENST00000378060 TGOLN2O43493 480 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PRAMEF4O60810 478 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms