RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 GOSR2O14653 212 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 SULT1B1O43704 296 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 PEX14O75381 377 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 GSG1LQ6UXU4 331 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 BTLAQ7Z6A9 289 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 SEMA6DQ8NFY4 1073 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 CPNE4Q96A23 557 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-202ENST00000377797 DNTTIP1Q9H147 329 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 ALG5Q9Y673 324 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 NOTCH4Q99466 2003 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 F5H0A9 414 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-202ENST00000377797 CCR6P51684 374 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 MC2RQ01718 297 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 CEACAM16Q2WEN9 425 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 SLC25A30Q5SVS4 291 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 MLXQ9UH92 298 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF223Q9UK11 482 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-202ENST00000377797 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
TCOF1-202ENST00000377797 PLSCR5A0PG75 271 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 CPT2P23786 658 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 CD79BP40259 229 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 LIMS1P48059 325 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 RAC1P63000 192 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 IL13RA1P78552 427 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 RBMS2Q15434 407 aaKnown RBP13.03□□□□□ -0.32
TCOF1-202ENST00000377797 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 GDPD3Q7L5L3 318 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 SSX6Q7RTT6 188 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 NOXA1Q86UR1 476 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 GIMAP1Q8WWP7 306 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 INTS12Q96CB8 462 aaKnown RBP13.03□□□□□ -0.32
TCOF1-202ENST00000377797 BANF2Q9H503 90 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 MAB21L2Q9Y586 359 aa13.03□□□□□ -0.32
TCOF1-202ENST00000377797 RRP8O43159 456 aaKnown RBP13.02□□□□□ -0.32
TCOF1-202ENST00000377797 HRGP04196 525 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 DGCR2P98153 550 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 CLN3Q13286 438 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 ETFDHQ16134 617 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 ISXQ2M1V0 245 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 EXOSC6Q5RKV6 272 aaKnown RBP13.02□□□□□ -0.32
TCOF1-202ENST00000377797 OR52I2Q8NH67 350 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 OR2M2Q96R28 347 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 HAO2Q9NYQ3 351 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 EHFQ9NZC4 300 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 A0A1B0GTH9 108 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 EIF4EP06730 217 aaKnown RBP13.02□□□□□ -0.32
TCOF1-202ENST00000377797 PET100P0DJ07 73 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 CDK2P24941 298 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 SHBQ15464 509 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 STEAP1BQ6NZ63 245 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 KANSL1Q7Z3B3 1105 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 DVL3Q92997 716 aaPredicted RBP13.02□□□□□ -0.32
TCOF1-202ENST00000377797 SARAFQ96BY9 339 aa13.02□□□□□ -0.32
TCOF1-202ENST00000377797 DSPPQ9NZW4 1301 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 TRAV1-2A0A0B4J238 106 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 RP2O75695 350 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 CCL3P10147 92 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 HOXB9P17482 250 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-202ENST00000377797 CCR9P51686 369 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 MGAT2Q10469 447 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 CMTM4Q8IZR5 234 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 OR2S2Q9NQN1 319 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 ZSCAN5BA6NJL1 495 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 SRD5A2P31213 254 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 DLX5P56178 289 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 RAB2AP61019 212 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 OR10K2Q6IF99 312 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 OR4K15Q8NH41 348 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 DPCDQ9BVM2 203 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-202ENST00000377797 PPIL3Q9H2H8 161 aaKnown RBP13.02□□□□□ -0.33
TCOF1-202ENST00000377797 KCNN3Q9UGI6 736 aa13.02□□□□□ -0.33
TCOF1-202ENST00000377797 OR6C65A6NJZ3 312 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 GABARAPH6UMI1 98 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 MSL3P1P0C860 447 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 ZNF121P58317 390 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-202ENST00000377797 RBPJQ06330 500 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 MESTQ5EB52 335 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 WDR38Q5JTN6 314 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 MDGA2Q7Z553 956 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 SLC6A15Q9H2J7 730 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 RANGRFQ9HD47 186 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-202ENST00000377797 LHX6Q9UPM6 363 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 SPAARA0A1B0GVQ0 90 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 HPP00738 406 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 IRF2P14316 349 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 MAGEB1P43366 347 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 SPINK14Q6IE38 97 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 C4orf45Q96LM5 186 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 GPR87Q9BY21 358 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 ZCCHC4Q9H5U6 513 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 CRLF2Q9HC73 371 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 GPR173Q9NS66 373 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 DNAJB11Q9UBS4 358 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 MPZL1O95297 269 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 IFI6P09912 130 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 ALOX5APP20292 161 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 AGTR1P30556 359 aa13.01□□□□□ -0.33
TCOF1-202ENST00000377797 CLDN6P56747 220 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms