RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 QDPRP09417 244 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 LIFP15018 202 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 TSPAN7P41732 249 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 DSCR4P56555 118 aaPredicted RBP17.96■□□□□ 0.47
VSX1-202ENST00000376709 CLDN6P56747 220 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 BIVMQ86UB2 503 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 NKAIN3Q8N8D7 197 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 PBOV1Q9GZY1 135 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 NOX3Q9HBY0 568 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 TAS2R8Q9NYW2 309 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 HSPB11Q9Y547 144 aa17.96■□□□□ 0.47
VSX1-202ENST00000376709 PMS2P1A4D2B8 440 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 ZNF878C9JN71 531 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 SYT7O43581 403 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 TLX3O43711 291 aaPredicted RBP17.96■□□□□ 0.46
VSX1-202ENST00000376709 PRAF2O60831 178 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 ZNF780AO75290 641 aaPredicted RBP17.96■□□□□ 0.46
VSX1-202ENST00000376709 STK17BO94768 372 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 PMS2P2O95744 297 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 TTRP02766 147 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 GNALP38405 381 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 MLF1P58340 268 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 TAF13Q15543 124 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 ZNF239Q16600 458 aaKnown RBP17.96■□□□□ 0.46
VSX1-202ENST00000376709 LINC00303Q3SY05 128 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 ELMOD2Q8IZ81 293 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 DEDD2Q8WXF8 326 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 FGGYQ96C11 551 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 GON7Q9BXV9 100 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 PROK2Q9HC23 129 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 EMC3Q9P0I2 261 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 ASH2LQ9UBL3 628 aa17.96■□□□□ 0.46
VSX1-202ENST00000376709 LOC102725191A0A1B0GVB3 256 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 CSF1P09603 554 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 PRSS3P35030 304 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 CLDN17P56750 224 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 GABREP78334 506 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 TOMM20Q15388 145 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 SLC25A47Q6Q0C1 308 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 GAL3ST1Q99999 423 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 LOXL2Q9Y4K0 774 aa17.95■□□□□ 0.46
VSX1-202ENST00000376709 HPXP02790 462 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 OTX2P32243 289 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 RPS18P62269 152 aaKnown RBP17.94■□□□□ 0.46
VSX1-202ENST00000376709 GUCA2AQ02747 115 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 SLC25A25Q6KCM7 469 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 ADGRE4PQ86SQ3 457 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 PADI1Q9ULC6 663 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 R4GN57 208 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 SDK2Q58EX2 2172 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 OR2M5A3KFT3 312 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 MEIS3P1A6NDR6 274 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 TGM6O95932 706 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 IGHEP01854 428 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 HIST3H3Q16695 136 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 FREM2Q5SZK8 3169 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 METTL11BQ5VVY1 283 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 ZNF627Q7L945 461 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 RANBP3Q9H6Z4 567 aaPredicted RBP17.94■□□□□ 0.46
VSX1-202ENST00000376709 SH2D2AQ9NP31 389 aa17.94■□□□□ 0.46
VSX1-202ENST00000376709 A0A1B0GUH1 482 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 SULT1A3P0DMM9 295 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 SULT1A4P0DMN0 295 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 PSMA6P60900 246 aaKnown RBP17.93■□□□□ 0.46
VSX1-202ENST00000376709 C9orf62Q8N4C0 152 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 FOXRED1Q96CU9 486 aaPredicted RBP17.93■□□□□ 0.46
VSX1-202ENST00000376709 SORCS2Q96PQ0 1159 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 ZFP64Q9NPA5 681 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 MYEF2Q9P2K5 600 aaKnown RBP17.93■□□□□ 0.46
VSX1-202ENST00000376709 ZIC3O60481 467 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 NDUFB6O95139 128 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 CD63P08962 238 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 CD37P11049 281 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 NR2C1P13056 603 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 GTF2F2P13984 249 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 TCN2P20062 427 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 BDKRB2P30411 391 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 H3F3AP84243 136 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 ZNF468Q5VIY5 522 aaPredicted RBP17.93■□□□□ 0.46
VSX1-202ENST00000376709 COMMD2Q86X83 199 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 OR4C16Q8NGL9 310 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 GRPEL2Q8TAA5 225 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 MOB1AQ9H8S9 216 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 TCFL5Q9UL49 500 aa17.93■□□□□ 0.46
VSX1-202ENST00000376709 IGHV3-15A0A0B4J1V0 119 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 A0A1B0GVI7 797 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 LOC390937A0A1W2PQ73 354 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 RER1O15258 196 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 EIF1BO60739 113 aaKnown RBP17.92■□□□□ 0.46
VSX1-202ENST00000376709 CBR3O75828 277 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 AVPR2P30518 371 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 GUCA1AP43080 201 aaPredicted RBP17.92■□□□□ 0.46
VSX1-202ENST00000376709 PRKXP51817 358 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 PLA2G2CQ5R387 149 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 ZNF782Q6ZMW2 699 aaPredicted RBP17.92■□□□□ 0.46
VSX1-202ENST00000376709 OR51E1Q8TCB6 317 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 PCDHGA5Q9Y5G8 931 aa17.92■□□□□ 0.46
VSX1-202ENST00000376709 MEIKINA0A087WXM9 373 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 FCER2P06734 321 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 GABRA1P14867 456 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms