RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 UNQ6126/PRO20091Q6UXV3 157 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 TRAPPC6BQ86SZ2 158 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 RPS19BP1Q86WX3 136 aaKnown RBP10.47□□□□□ -0.73
DDR1-227ENST00000376570 BEST3Q8N1M1 668 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 C9orf62Q8N4C0 152 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 ZNF721Q8TF20 911 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 CHST6Q9GZX3 395 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 B3GNT2Q9NY97 397 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 COL4A4P53420 1690 aaPredicted RBP10.47□□□□□ -0.73
DDR1-227ENST00000376570 PCNX3Q9H6A9 2034 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 THADAQ6YHU6 1953 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 A0A1B0GW55 424 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 PMS2P1A4D2B8 440 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 CXCL13O43927 109 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 DUX4L2P0CJ85 424 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 DUX4L3P0CJ86 424 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 DUX4L4P0CJ87 422 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 DUX4L5P0CJ88 424 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 DUX4L6P0CJ89 424 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 DUX4L7P0CJ90 424 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 B4GALT1P15291 398 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 ZNF16P17020 682 aaPredicted RBP10.47□□□□□ -0.73
DDR1-227ENST00000376570 AMY2BP19961 511 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 POU3F2P20265 443 aaPredicted RBP10.47□□□□□ -0.73
DDR1-227ENST00000376570 CCR9P51686 369 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 PMPCAQ10713 525 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 UBE2NLQ5JXB2 153 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 RAB12Q6IQ22 244 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 LIX1LQ8IVB5 337 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 FAM71CQ8NEG0 241 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 ST8SIA4Q92187 359 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 PIGCQ92535 297 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 CTHRC1Q96CG8 243 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 GPR84Q9NQS5 396 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 LANCL2Q9NS86 450 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 DUX4Q9UBX2 424 aa10.47□□□□□ -0.73
DDR1-227ENST00000376570 OR2AT4A6NND4 320 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 PEX14O75381 377 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 HLA-AP01891 365 aaKnown RBP10.46□□□□□ -0.73
DDR1-227ENST00000376570 FAHP16930 419 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 FOLR3P41439 243 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 RBM34P42696 430 aaKnown RBP10.46□□□□□ -0.73
DDR1-227ENST00000376570 SLC17A1Q14916 467 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 TRAM1Q15629 374 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 TMEM255AQ5JRV8 349 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 YIPF5Q969M3 257 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 MARVELD1Q9BSK0 173 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 ICAM5Q9UMF0 924 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 SPG11Q96JI7 2443 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 FRG2CA6NGY1 282 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.73
DDR1-227ENST00000376570 ACOT7O00154 380 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 ZNF432O94892 652 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 RRASP10301 218 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 INSM1Q01101 510 aaPredicted RBP10.46□□□□□ -0.73
DDR1-227ENST00000376570 ZNF141Q15928 474 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 GPR139Q6DWJ6 353 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 TPRA1Q86W33 373 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 OR4C16Q8NGL9 310 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 WDFY2Q96P53 400 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 DCBLD2Q96PD2 775 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 ZNF436Q9C0F3 470 aaPredicted RBP10.46□□□□□ -0.73
DDR1-227ENST00000376570 MFFQ9GZY8 342 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 PPP1R3EQ9H7J1 279 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 GPR173Q9NS66 373 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 SDHAF2Q9NX18 166 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 MMACHCQ9Y4U1 282 aa10.46□□□□□ -0.73
DDR1-227ENST00000376570 OR5H15A6NDH6 313 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 LILRA5A6NI73 299 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 F5H0A9 414 aaPredicted RBP10.46□□□□□ -0.74
DDR1-227ENST00000376570 POU2F2P09086 479 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 FCGR2AP12318 317 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 CSNK2A1P68400 391 aaPredicted RBP10.46□□□□□ -0.74
DDR1-227ENST00000376570 AANATQ16613 207 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 GLIPR1L1Q6UWM5 242 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 KCTD20Q7Z5Y7 419 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 GRAMD2AQ8IUY3 354 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 CSNK2A3Q8NEV1 391 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 OR1J4Q8NGS1 313 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 ADAMTS14Q8WXS8 1223 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 PGLYRP3Q96LB9 341 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 LAT2Q9GZY6 243 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 ABRACLQ9P1F3 81 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 ST6GALNAC2Q9UJ37 374 aa10.46□□□□□ -0.74
DDR1-227ENST00000376570 STMND1H3BQB6 276 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 ZNF208O43345 1280 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 IGHG1P01857 330 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 ZNF806P0C7X5 589 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 MST1P26927 711 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 SLC26A5P58743 744 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 TMEM71Q6P5X7 295 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 ANKRD37Q7Z713 158 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 LRRTM1Q86UE6 522 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 OR52N4Q8NGI2 321 aa10.45□□□□□ -0.74
DDR1-227ENST00000376570 SCARF2Q96GP6 870 aaPredicted RBP10.45□□□□□ -0.74
DDR1-227ENST00000376570 OR2M2Q96R28 347 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms