RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ULBP3Q9BZM4 244 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 NMNAT2Q9BZQ4 307 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 COMMD4Q9H0A8 199 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 KLHDC2Q9Y2U9 406 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 MMP24Q9Y5R2 645 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 CLEC3AO75596 197 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ABHD16AO95870 558 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 NGFRP08138 427 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ODF4Q2M2E3 257 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF674Q2M3X9 581 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 EXOSC6Q5RKV6 272 aaKnown RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 HIST2H3PS2Q5TEC6 136 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF385CQ66K41 422 aaPredicted RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 FAM166AQ6J272 317 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF529Q6P280 563 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 OR2A12Q8NGT7 310 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 OR5R1Q8NH85 324 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 SLC25A43Q8WUT9 341 aaPredicted RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 GAL3ST3Q96A11 431 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 MUCL1Q96DR8 90 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ADAD1Q96M93 576 aaKnown RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF681Q96N22 645 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 OR2AG1Q9H205 316 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 PDE7BQ9NP56 450 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 DNAJB11Q9UBS4 358 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF724A8MTY0 619 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 H7C4K7 107 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 LEFTY2O00292 366 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 CST4P01036 141 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 MBP02144 154 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 F13BP05160 661 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 DBIP07108 87 aaKnown RBP11.62□□□□□ -0.55
PRPF4-201ENST00000374198 NID1P14543 1247 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 G0S2P27469 103 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 RABIFP47224 123 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 LSSP48449 732 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 UCP2P55851 309 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 LINC01590Q5TEZ4 76 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 OR10AD1Q8NGE0 317 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 RSC1A1Q92681 617 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 SLC2A4RGQ9NR83 387 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 CUTCQ9NTM9 273 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 MARCH5Q9NX47 278 aa11.62□□□□□ -0.55
PRPF4-201ENST00000374198 TMEM212A6NML5 194 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 MARCH11A6NNE9 402 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 C4orf51C9J302 202 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 FABP4P15090 132 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 RPS4Y1P22090 263 aaKnown RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 HIST1H1TP22492 207 aaPredicted RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 PMPCAQ10713 525 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 MIDNQ504T8 468 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF619Q8N2I2 560 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 CASD1Q96PB1 797 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 CDCA3Q99618 268 aaPredicted RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 MACROD1Q9BQ69 325 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 NDUFAF3Q9BU61 184 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ALG12Q9BV10 488 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 DPEP2Q9H4A9 486 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 KCNJ16Q9NPI9 418 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 HCSTQ9UBK5 93 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 MTCH2Q9Y6C9 303 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF780BQ9Y6R6 833 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 TMEM235A6NFC5 223 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ELOA3DA6NLF2 546 aaPredicted RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 PEX12O00623 359 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 PTBP3O95758 552 aaKnown RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 RPL4P36578 427 aaKnown RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ADPRHP54922 357 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ELOA3BQ3SY89 546 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 TMEM35AQ53FP2 167 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 SLC16A9Q7RTY1 509 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF615Q8N8J6 731 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 BEND2Q8NDZ0 799 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ELOA3Q8NG57 546 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 OR9K2Q8NGE7 335 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 OR51F2Q8NH61 342 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 RNF128Q8TEB7 428 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 MVB12AQ96EY5 273 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 DTD2Q96FN9 168 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 PARP12Q9H0J9 701 aaKnown RBP11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ADAP2Q9NPF8 381 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 ENTPD2Q9Y5L3 495 aa11.61□□□□□ -0.55
PRPF4-201ENST00000374198 CHD9Q3L8U1 2897 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 NPIPA5A0A0B4J1W7 369 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 A0A0B4J2E0 115 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 A0A1B0GX12 115 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 FITM1A5D6W6 292 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 FAM221BA6H8Z2 402 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 NPIPA7E9PJI5 369 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 ERI3O43414 337 aaKnown RBP11.6□□□□□ -0.55
PRPF4-201ENST00000374198 NPIPA8P0DM63 369 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 ERGP11308 486 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 TIMP2P16035 220 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 IL2RGP31785 369 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 CSNK1G2P78368 415 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 NKX6-1P78426 367 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms