RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 OR10A3P58181 314 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 NAXDQ8IW45 347 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 GPR119Q8TDV5 335 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
LMX1B-202ENST00000373474 PLEKHF2Q9H8W4 249 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 ENPP1P22413 925 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 GSK3AP49840 483 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 LIPNQ5VXI9 398 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 RPUSD3Q6P087 351 aaKnown RBP12.96□□□□□ -0.33
LMX1B-202ENST00000373474 Q6ZRG5 221 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 TVP23CQ96ET8 276 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 LINC00615Q96LM1 132 aaPredicted RBP12.96□□□□□ -0.33
LMX1B-202ENST00000373474 B3GALT5Q9Y2C3 310 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 STRCQ7RTU9 1775 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 APOBEC1P41238 236 aaKnown RBP12.96□□□□□ -0.33
LMX1B-202ENST00000373474 NKX2-1P43699 371 aaPredicted RBP12.96□□□□□ -0.33
LMX1B-202ENST00000373474 DIO1P49895 249 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 SIGIRRQ6IA17 410 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 CCDC74AQ96AQ1 378 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 SEH1LQ96EE3 360 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 KIRREL1Q96J84 757 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 ARHGDIGQ99819 225 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 USB1Q9BQ65 265 aaKnown RBP12.96□□□□□ -0.33
LMX1B-202ENST00000373474 FGF22Q9HCT0 170 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 NOSIPQ9Y314 301 aaKnown RBP12.96□□□□□ -0.33
LMX1B-202ENST00000373474 CAMKMTQ7Z624 323 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 PARD6AQ9NPB6 346 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 NXT1Q9UKK6 140 aaKnown RBP12.96□□□□□ -0.34
LMX1B-202ENST00000373474 PRAMEF25A6NGN4 478 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF891A8MT65 544 aaPredicted RBP12.96□□□□□ -0.34
LMX1B-202ENST00000373474 CD1CP29017 333 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 NPY4RP50391 375 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 ANGPTL5Q86XS5 388 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 SLC35G3Q8N808 338 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 SRRQ9GZT4 340 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 ZMAT3Q9HA38 289 aaKnown RBP12.96□□□□□ -0.34
LMX1B-202ENST00000373474 GDF2Q9UK05 429 aaPredicted RBP12.96□□□□□ -0.34
LMX1B-202ENST00000373474 PIGLQ9Y2B2 252 aa12.96□□□□□ -0.34
LMX1B-202ENST00000373474 ABCA3Q99758 1704 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 PLSCR5A0PG75 271 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 SPNP16150 400 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 P2RX3P56373 397 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 EGR3Q06889 387 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 BAMBIQ13145 260 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 SLC38A6Q8IZM9 456 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 ELSPBP1Q96BH3 223 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 A0A087WV62 115 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 SLC31A2O15432 143 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 SIGLEC6O43699 453 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 FGF17O60258 216 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 RAD52P43351 418 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 C9orf135Q5VTT2 229 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 CA13Q8N1Q1 262 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 ASB16Q96NS5 453 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 RHNO1Q9BSD3 238 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 A0A1B0GX78 115 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 RD3LP0DJH9 198 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 TGM1P22735 817 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 RHOUQ7L0Q8 258 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 COMMD1Q8N668 190 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF485Q8NCK3 441 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 STT3BQ8TCJ2 826 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 SOX7Q9BT81 388 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 CXorf51AA0A1B0GTR3 108 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 DOK3Q7L591 496 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 PRSS42Q7Z5A4 293 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 APH1AQ96BI3 265 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 TECTBQ96PL2 329 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 NUDT9Q9BW91 350 aa12.95□□□□□ -0.34
LMX1B-202ENST00000373474 ACTR3CQ9C0K3 210 aaPredicted RBP12.95□□□□□ -0.34
LMX1B-202ENST00000373474 TMEFF2Q9UIK5 374 aaPredicted RBP12.95□□□□□ -0.34
LMX1B-202ENST00000373474 A0A1B0GUH1 482 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 LINC01553A4QN01 128 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 HSPB2A8KAH6 182 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 GABRB1P18505 474 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 PSMB6P28072 239 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CARD18P57730 90 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 HSPB2Q16082 182 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 NKG7Q16617 165 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 TIGITQ495A1 244 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 RPL7L1Q6DKI1 246 aaKnown RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 GOT1L1Q8NHS2 421 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 SMIM19Q96E16 107 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 RAB18Q9NP72 206 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 HEYLQ9NQ87 328 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CLCF1Q9UBD9 225 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 MED16Q9Y2X0 877 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 PRRT4C9JH25 899 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 GZMKP49863 264 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 ELAVL1Q15717 326 aaKnown RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 PRSS36Q5K4E3 855 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CSF3RQ99062 836 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 LAT2Q9GZY6 243 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF346Q9UL40 294 aaKnown RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CTSLP07711 333 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 TAS2R45P59539 299 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms