RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 KLHL26Q53HC5 615 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 TRAPPC6BQ86SZ2 158 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 ZNF679Q8IYX0 411 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 ZNF563Q8TA94 476 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 SFT2D1Q8WV19 159 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 SLC25A36Q96CQ1 311 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 ZC3H10Q96K80 434 aaKnown RBP13.28□□□□□ -0.28
COL9A2-202ENST00000372748 TWSG1Q9GZX9 223 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 MYOZ1Q9NP98 299 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-202ENST00000372748 PRR13Q9NZ81 148 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 SLC16A7O60669 478 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL9A2-202ENST00000372748 OR6A2O95222 327 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 WISP1O95388 367 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 PNMTP11086 282 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 CBR1P16152 277 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 CFPP27918 469 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 HRH1P35367 487 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 HHEXQ03014 270 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 TMEM200AQ86VY9 491 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 BHLHE23Q8NDY6 225 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 OR4D6Q8NGJ1 314 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 OR2S2Q9NQN1 319 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 ZFP57Q9NU63 452 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 UQCC1Q9NVA1 299 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 EDARQ9UNE0 448 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 B4DGG1 531 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 XKRYO14609 159 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 SNAPINO95295 136 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 MPZL1O95297 269 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 TXNDC12O95881 172 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 TPT1P13693 172 aaKnown RBP13.27□□□□□ -0.28
COL9A2-202ENST00000372748 PSMB6P28072 239 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 SERPINF1P36955 418 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 RBM39Q14498 530 aaKnown RBP13.27□□□□□ -0.28
COL9A2-202ENST00000372748 AVPI1Q5T686 147 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 ARMC6Q6NXE6 501 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 NANPQ8TBE9 248 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 PRRT1Q99946 306 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 NUDT9Q9BW91 350 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 OR10A5Q9H207 317 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 SLCO1B1Q9Y6L6 691 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 NUP210LQ5VU65 1888 aa13.27□□□□□ -0.28
COL9A2-202ENST00000372748 DNASE1L1P49184 302 aa13.27□□□□□ -0.29
COL9A2-202ENST00000372748 PAQR4Q8N4S7 273 aaPredicted RBP13.27□□□□□ -0.29
COL9A2-202ENST00000372748 GPBAR1Q8TDU6 330 aa13.27□□□□□ -0.29
COL9A2-202ENST00000372748 RNF128Q8TEB7 428 aa13.27□□□□□ -0.29
COL9A2-202ENST00000372748 RNF141Q8WVD5 230 aa13.27□□□□□ -0.29
COL9A2-202ENST00000372748 MRPL22Q9NWU5 206 aaKnown RBP13.27□□□□□ -0.29
COL9A2-202ENST00000372748 ZMAT5Q9UDW3 170 aaKnown RBP13.27□□□□□ -0.29
COL9A2-202ENST00000372748 EMC9Q9Y3B6 208 aa13.27□□□□□ -0.29
COL9A2-202ENST00000372748 PIAS3Q9Y6X2 628 aa13.27□□□□□ -0.29
COL9A2-202ENST00000372748 AGPAT2O15120 278 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 CRHP06850 196 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 CTSEP14091 401 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 KIF26BQ2KJY2 2108 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 GFOD2Q3B7J2 385 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 DGAT2Q96PD7 388 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 ZNF587Q96SQ5 575 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-202ENST00000372748 SLCO5A1Q9H2Y9 848 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 PRTFDC1Q9NRG1 225 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 DHCR7Q9UBM7 475 aaKnown RBP13.26□□□□□ -0.29
COL9A2-202ENST00000372748 CARHSP1Q9Y2V2 147 aaKnown RBP13.26□□□□□ -0.29
COL9A2-202ENST00000372748 PQLC2LA1A4F0 135 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 MSGN1A6NI15 193 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 CD79AP11912 226 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 GPR3P46089 330 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 SNRPEP62304 92 aaKnown RBP13.26□□□□□ -0.29
COL9A2-202ENST00000372748 SKP2Q13309 424 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 BIKQ13323 160 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 ETV3LQ6ZN32 361 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 SLC16A13Q7RTY0 426 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 FAM160A2Q8N612 972 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-202ENST00000372748 ZSCAN4Q8NAM6 433 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-202ENST00000372748 METTL21AQ8WXB1 218 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 FN3KRPQ9HA64 309 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 FBRSQ9HAH7 460 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 LRP12Q9Y561 859 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 FREM3P0C091 2139 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 LAMA1P25391 3075 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 LINC00587B1AMM8 73 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 SEMA4FO95754 770 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 ACAA1P09110 424 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-202ENST00000372748 GABRG2P18507 467 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 AKR1C3P42330 323 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 PTGFRP43088 359 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 PPICP45877 212 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 YPEL5P62699 121 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 TEX30Q5JUR7 227 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 SLC18B1Q6NT16 456 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 PRR22Q8IZ63 422 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 ZSCAN1Q8NBB4 408 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 CYYR1Q96J86 154 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 ABHD6Q9BV23 337 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 RTN4RQ9BZR6 473 aa13.26□□□□□ -0.29
COL9A2-202ENST00000372748 LOC101059948A0A1B0GTJ6 334 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms