RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MTCH2Q9Y6C9 303 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TRBV5-4A0A0C4DH59 114 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 MKRN2OSH3BPM6 223 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 PAPLNO95428 1278 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 ATP1B1P05026 303 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 CNR1P21554 472 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR4A4PQ8NGN8 299 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 AMBRA1Q9C0C7 1298 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 GABARAPL1Q9H0R8 117 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 GCM1Q9NP62 436 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 CORINQ9Y5Q5 1042 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 A0A1B0GWA3 101 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM210A6NLX4 147 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC17A3O00476 420 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 GPX2P18283 190 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 FPR3P25089 353 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 PIGPP57054 158 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 SEC61A1P61619 476 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 INPP5JQ15735 1006 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 C8orf44Q96CB5 159 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 SDSLQ96GA7 329 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 C19orf43Q9BQ61 176 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 SGPP1Q9BX95 441 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 C12orf49Q9H741 205 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 AK3Q9UIJ7 227 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 A8MVM7 634 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 NME2P22392 152 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC35A2P78381 396 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 EBPQ15125 230 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 FAM169BQ8N8A8 192 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR13C5Q8NGS8 318 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 MEGF10Q96KG7 1140 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 DEFB127Q9H1M4 99 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRDM7Q9NQW5 492 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 SIAH2O43255 324 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 P2RX1P51575 399 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 CDC20Q12834 499 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 METTL9Q9H1A3 318 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 POMT2Q9UKY4 750 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 MPPED1O15442 326 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 OLFM2O95897 454 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 DBHP09172 617 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 TP53I13Q8NBR0 393 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 RBMXL1Q96E39 390 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 TIMP4Q99727 224 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 CLEC2DQ9UHP7 191 aa12.16□□□□□ -0.46
RAPGEF1-201ENST00000372189 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 SOCS6O14544 535 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 CHEK1O14757 476 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 PLP1P60201 277 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 H3F3AP84243 136 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 TRMT12Q53H54 448 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 MKXQ8IYA7 352 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 DEFB124Q8NES8 71 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 TNFRSF13CQ96RJ3 184 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 C1orf198Q9H425 327 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 A0A1W2PR48 441 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 D6RAR5 112 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 TRAPPC2LH3BP13 241 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 TRIM77I1YAP6 450 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 ZNF593O00488 134 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 FOXK2Q01167 660 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC16A11Q8NCK7 471 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 PECRQ9BY49 303 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 WDR76Q9H967 626 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 LHX6Q9UPM6 363 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 I6L893 689 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 FKBP2P26885 142 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 RPS18P62269 152 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 ACSM1Q08AH1 577 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 TOMM34Q15785 309 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 ACKR1Q16570 336 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 XKR7Q5GH72 579 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 DHRS13Q6UX07 377 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 ZNF610Q8N9Z0 462 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC25A43Q8WUT9 341 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 KCNE4Q8WWG9 221 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 PSMF1Q92530 271 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 C19orf53Q9UNZ5 99 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 IGHV1OR15-9A0A0B4J2B8 117 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRAMEF27A3QJZ7 478 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 ZGLP1P0C6A0 271 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 FCGR2AP12318 317 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 APOBEC1P41238 236 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 PPIAP62937 165 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRAMEF9Q5VWM5 478 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM92Q6UXU6 159 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 DLEU7Q6UYE1 221 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 RBMS3Q6XE24 437 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 GRINAQ7Z429 371 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 TCTEX1D1Q8N7M0 179 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 SFRP2Q96HF1 295 aa12.15□□□□□ -0.46
RAPGEF1-201ENST00000372189 COL4A5P29400 1685 aa12.15□□□□□ -0.47
RAPGEF1-201ENST00000372189 H7BYZ3 331 aa12.15□□□□□ -0.47
RAPGEF1-201ENST00000372189 MSMO1Q15800 293 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms