RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RGS6P49758 472 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TNFAIP6P98066 277 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SLC3A1Q07837 685 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 MEP1BQ16820 701 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ZNF362Q5T0B9 420 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ZNF770Q6IQ21 691 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 LEG1Q6P5S2 330 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 C16orf89Q6UX73 402 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ZNF620Q6ZNG0 422 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ZDHHC21Q8IVQ6 265 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 FITM2Q8N6M3 262 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ZNF283Q8N7M2 679 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 MCUR1Q96AQ8 359 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RAB39BQ96DA2 213 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TIMD4Q96H15 378 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SIGLEC11Q96RL6 698 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 REPIN1Q9BWE0 567 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TMPRSS13Q9BYE2 586 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SRA1Q9HD15 236 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 NDE1Q9NXR1 346 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 IL19Q9UHD0 177 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 NPTNQ9Y639 398 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 A0A0A6YYJ9 748 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TCRBV5S2A0A599 114 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR6C68A6NDL8 312 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 LIPNQ5VXI9 398 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SLC18B1Q6NT16 456 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 FAHD2BQ6P2I3 314 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DNM1P34Q6PK57 102 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR4C15Q8NGM1 316 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR4K13Q8NH42 304 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GNPDA2Q8TDQ7 276 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 FAHD2AQ96GK7 314 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 BTBD10Q9BSF8 475 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 IFT27Q9BW83 186 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 C1QTNF5Q9BXJ0 243 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TRIM15Q9C019 465 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 HDHD2Q9H0R4 259 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 METTL17Q9H7H0 456 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PNRC2Q9NPJ4 139 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TMEM106BQ9NUM4 274 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 IL20Q9NYY1 176 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ACTR3BQ9P1U1 418 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 LYVE1Q9Y5Y7 322 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DYSFO75923 2080 aa11.54□□□□□ -0.56
TNFRSF1A-202ENST00000366159 BHLHE40O14503 412 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 KRT36O76013 467 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ATP6V1B2P21281 511 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GGT2P36268 569 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 IFNGR2P38484 337 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 HLXQ14774 488 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 CORO6Q6QEF8 472 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 CFAP77Q6ZQR2 320 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 JAZF1Q86VZ6 243 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SEMA6DQ8NFY4 1073 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR2Z1Q8NG97 314 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 APOBEC3DQ96AK3 386 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 EGLN3Q9H6Z9 239 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RPRD1BQ9NQG5 326 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 MRPL22Q9NWU5 206 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 CYB5R1Q9UHQ9 305 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TMCC3Q9ULS5 477 aa11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 POLR3KQ9Y2Y1 108 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PPIAL4CA0A0B4J2A2 164 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 J3QLI3 93 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 VENTXO95231 258 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 RENP00797 406 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 FSHBP01225 129 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 GASTP01350 101 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TNFRSF1AP19438 455 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 GATA3P23771 443 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZFP36P26651 326 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TUSC1Q2TAM9 212 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TMEM155Q4W5P6 130 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CYP2R1Q6VVX0 501 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LRRC28Q86X40 367 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LINC00471Q8N535 108 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SDR9C7Q8NEX9 313 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR8G5Q8NG78 346 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR5L1Q8NGL2 311 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ITLN1Q8WWA0 313 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNRF4Q8WWF5 429 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CCT8L2Q96SF2 557 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 GAL3ST1Q99999 423 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PLA2G12AQ9BZM1 189 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 FN3KQ9H479 309 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 GCM1Q9NP62 436 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PTTG3PQ9NZH4 202 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OPN4Q9UHM6 478 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CDH10Q9Y6N8 788 aa11.52□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ARHGAP32A7KAX9 2087 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LOC105371242A0A075B767 164 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 A0A0G2JMP0 313 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 A0A0X1KG70 313 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 IQCF6A8MYZ5 107 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 B2RBV5 119 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MLNRO43193 412 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms