RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ZNF345Q14585 488 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 MOGAT2Q3SYC2 334 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 BEND4Q6ZU67 534 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 ANKRD33Q7Z3H0 272 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 ZNF679Q8IYX0 411 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 SLC41A2Q96JW4 573 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 S100A13Q99584 98 aa11.46□□□□□ -0.57
VAMP1-201ENST00000361716 CDC14CA4D256 554 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 KNG1P01042 644 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 JMJD7P0C870 316 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 HRH1P35367 487 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 DNASE1L1P49184 302 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 ZNF417Q8TAU3 575 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 CCDC74AQ96AQ1 378 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 THOC3Q96J01 351 aaKnown RBP11.46□□□□□ -0.58
VAMP1-201ENST00000361716 GPR61Q9BZJ8 451 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 KCNJ16Q9NPI9 418 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 PPP4R1LQ9P1A2 415 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 CKLFQ9UBR5 152 aa11.46□□□□□ -0.58
VAMP1-201ENST00000361716 SLC34A2O95436 690 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 EML2O95834 649 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 SPARCP09486 303 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 SLC2A5P22732 501 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 ARHGAP19Q14CB8 494 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 GFI1BQ5VTD9 330 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 IL34Q6ZMJ4 242 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 TBC1D29Q9UFV1 150 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 LSM5Q9Y4Y9 91 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 KIF26AQ9ULI4 1882 aaPredicted RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 CRHP06850 196 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 NGFRP08138 427 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 GJA4P35212 333 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 SULT1A1P50225 295 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 KDM8Q8N371 416 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 GTF3AQ92664 365 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 SPACA7Q96KW9 195 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 RBM14Q96PK6 669 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 OCSTAMPQ9BR26 566 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 UTP23Q9BRU9 249 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 EPHX3Q9H6B9 360 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 SEBOXQ9HB31 216 aaPredicted RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 FGF22Q9HCT0 170 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 CENPMQ9NSP4 180 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 KCNE5Q9UJ90 142 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 COLEC10Q9Y6Z7 277 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 SNRNP200O75643 2136 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 ZNF726A6NNF4 738 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 P2RX6O15547 441 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 C1QL1O75973 258 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 RNH1P13489 461 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 NID1P14543 1247 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 CD96P40200 585 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 CAMLGP49069 296 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 FHITP49789 147 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 CST6Q15828 149 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 EIF5AL1Q6IS14 154 aaKnown RBP11.45□□□□□ -0.58
VAMP1-201ENST00000361716 BIVMQ86UB2 503 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 TRIM2Q9C040 744 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 WDR76Q9H967 626 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 MAFFQ9ULX9 164 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 WIF1Q9Y5W5 379 aa11.45□□□□□ -0.58
VAMP1-201ENST00000361716 WDFY4Q6ZS81 3184 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 LOC100289279A0A1B0GTE1 492 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 A0A1W2PPC1 479 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 TIMP1P01033 207 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 CD8AP01732 235 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 CT62P0C5K7 136 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 ZNF77Q15935 545 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 MIDNQ504T8 468 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 DMBX1Q8NFW5 382 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 OR13C8Q8NGS7 320 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 OR9A4Q8NGU2 314 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 SFXN5Q8TD22 340 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 CMTM3Q96MX0 182 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 PISDQ9UG56 409 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 MRM2Q9UI43 246 aaKnown RBP11.44□□□□□ -0.58
VAMP1-201ENST00000361716 GLI4P10075 376 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 SLC25A4P12235 298 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 RBP2P50120 134 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 RAB32Q13637 225 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 AKR1C8PQ5T2L2 129 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 FJX1Q86VR8 437 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 LRP11Q86VZ4 500 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 RNF113BQ8IZP6 322 aaKnown RBP11.44□□□□□ -0.58
VAMP1-201ENST00000361716 RSPRY1Q96DX4 576 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 FAM83CQ9BQN1 747 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 ZBP1Q9H171 429 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 DCAF16Q9NXF7 216 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 ADAM29Q9UKF5 820 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 DHDHQ9UQ10 334 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 TCF20Q9UGU0 1960 aaKnown RBP11.44□□□□□ -0.58
VAMP1-201ENST00000361716 THEGLP0DJG4 465 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 NKX6-1P78426 367 aaPredicted RBP11.44□□□□□ -0.58
VAMP1-201ENST00000361716 PMPCAQ10713 525 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 MEF2DQ14814 521 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 KIRREL2Q6UWL6 708 aa11.44□□□□□ -0.58
VAMP1-201ENST00000361716 UNQ9370/PRO34162Q6UXP9 181 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms