RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 EDARADDQ8WWZ3 215 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 H0YIV9 168 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 T-ENOLP0DO92 83 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 CD70P32970 193 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 DHODHQ02127 395 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 DCXRQ7Z4W1 244 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 PDLIM5Q96HC4 596 aaKnown RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 OR8B4Q96RC9 309 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 EFSO43281 561 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 WDR1O75083 606 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 LIMS3P0CW19 117 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 LIMS4P0CW20 117 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 ADPRHP54922 357 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 RAB38P57729 211 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 SLC25A43Q8WUT9 341 aaPredicted RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 DYRK2Q92630 601 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 DTD2Q96FN9 168 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 CYB5R1Q9UHQ9 305 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 IHHQ14623 411 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 CTU2Q2VPK5 515 aaKnown RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 LRP11Q86VZ4 500 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 APOOQ9BUR5 198 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 LY86O95711 162 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 SPTBP11277 2137 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 ZFPM2Q8WW38 1151 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 TP53BP1Q12888 1972 aaPredicted RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 TRIP12Q14669 1992 aaPredicted RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 HPP00738 406 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 STUMQ69YW2 141 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 MS4A10Q96PG2 267 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 KCNK15Q9H427 330 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 SIRT3Q9NTG7 399 aaPredicted RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 PLSCR1O15162 318 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 Q6ZN92 141 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 PTRH1Q86Y79 214 aaKnown RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 BAP18Q8IXM2 172 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 ERGIC1Q969X5 290 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 OPALINQ96PE5 141 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 MACROD1Q9BQ69 325 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 PSENENQ9NZ42 101 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 NAT8BQ9UHF3 227 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 SLC5A10A0PJK1 596 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 HCRTO43612 131 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 MAMDC4Q6UXC1 1216 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 RXFP4Q8TDU9 374 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 ZDHHC5Q9C0B5 715 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 CHD5Q8TDI0 1954 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 TNFRSF4P43489 277 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 SLCO1B1Q9Y6L6 691 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 RAB27BO00194 218 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 QDPRP09417 244 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 GABRB1P18505 474 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 NPAS1Q99742 590 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 TREX1Q9NSU2 369 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ASXL3Q9C0F0 2248 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 TOMM34Q15785 309 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 GALNT16Q8N428 558 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 NQO2P16083 231 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 RPL24P83731 157 aaKnown RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 PJVKQ0ZLH3 352 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 SHHQ15465 462 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 OR4C16Q8NGL9 310 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 DUSP13Q9UII6 198 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF835Q9Y2P0 537 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 A0A1B0GTQ1 180 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF628Q5EBL2 1059 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ARRDC3Q96B67 414 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 DHRS4Q9BTZ2 278 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 UNCXA6NJT0 531 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 THEM4Q5T1C6 240 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 FCRL6Q6DN72 434 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 LINC00346Q8IVM7 164 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 OR5D13Q8NGL4 314 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 SERINC4A6NH21 518 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 SELENOFO60613 162 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 AQP8O94778 261 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 DCDP81605 110 aaKnown RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF66Q6ZN08 573 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 LYG2Q86SG7 212 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 CPPED1Q9BRF8 314 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 OR52A4PA6NMU1 304 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 M0R1X1 148 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 FZD6O60353 706 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 OR3A1P47881 315 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 NOVA1P51513 510 aaKnown RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 CLDN20P56880 219 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 Q6ZSR6 202 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 PPP1R3CQ9UQK1 317 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ASCC3Q8N3C0 2202 aaKnown RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 CCL14Q16627 93 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 WTIPA6NIX2 430 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 SCRG1O75711 98 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ACHEP22303 614 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 AOAHP28039 575 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 HRH1P35367 487 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ANKRD16Q6P6B7 361 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 RPL29P47914 159 aaKnown RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 SCGB1D4Q6XE38 83 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms