RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZDHHC11Q9H8X9 412 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 KCPQ6ZWJ8 1503 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 SRMP19623 302 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 HCCSP53701 268 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 FABP9Q0Z7S8 132 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 CCL26Q9Y258 94 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 ATRNO75882 1429 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 YKT6O15498 198 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 PDGFBP01127 241 aaPredicted RBP15.79■□□□□ 0.12
COL27A1-201ENST00000356083 IGHV3-13P01766 116 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 IGHV3-7P01780 117 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 HMGN3Q15651 99 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 TMEM255BQ8WV15 326 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 RAB19A4D1S5 217 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 SBK2P0C263 348 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 MYF5P13349 255 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 FGF7P21781 194 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 OPRK1P41145 380 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF83P51522 516 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 LCN8Q6JVE9 175 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 WFDC3Q8IUB2 231 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 PXT1Q8NFP0 134 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 OR5A2Q8NGI9 324 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 TMEM59LQ9UK28 342 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 CACNA1EQ15878 2313 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 BPIFB3P59826 476 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 ZXDAP98168 799 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 ASCL1P50553 236 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF91Q05481 1191 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 LAX1Q8IWV1 398 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 KISS1RQ969F8 398 aaPredicted RBP15.79■□□□□ 0.12
COL27A1-201ENST00000356083 BCO1Q9HAY6 547 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 CEPT1Q9Y6K0 416 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 PRKNO60260 465 aaPredicted RBP15.79■□□□□ 0.12
COL27A1-201ENST00000356083 H2AFB1P0C5Y9 115 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 YPEL5P62699 121 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 C19orf35Q6ZS72 473 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 FA2HQ7L5A8 372 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 DYNLRB2Q8TF09 96 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 C2CD4CQ8TF44 421 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 ADAMTS14Q8WXS8 1223 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 SLCO4A1Q96BD0 722 aa15.79■□□□□ 0.12
COL27A1-201ENST00000356083 UBR2Q8IWV8 1755 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 A0A1B0GX78 115 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 TMEM97Q5BJF2 176 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 FBXL6Q8N531 539 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 RNF141Q8WVD5 230 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 ICAM5Q9UMF0 924 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 SLC17A4Q9Y2C5 497 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 TLCD2A6NGC4 264 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 SLC10A3P09131 477 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 MMP7P09237 267 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 GDNFP39905 211 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 ALKBH1Q13686 389 aaKnown RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 MAML2Q8IZL2 1156 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 SDCBPO00560 298 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 OR2T7P0C7T2 308 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 HTRA4P83105 476 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 TMEM135Q86UB9 458 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 OR10P1Q8NGE3 313 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 EGLN2Q96KS0 407 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 GORASP2Q9H8Y8 452 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 IGSF5Q9NSI5 407 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 OR51B4Q9Y5P0 310 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 LOC100289279A0A1B0GTE1 492 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 MS4A2Q01362 244 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 YOD1Q5VVQ6 348 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 BTF3L4Q96K17 158 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 FBXO34Q9NWN3 711 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 POLDIP2Q9Y2S7 368 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 EP300Q09472 2414 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 TEKQ02763 1124 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 BCDIN3DQ7Z5W3 292 aaKnown RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 BCL2L2Q92843 193 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 SLCO2A1Q92959 643 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 DUSP22Q9NRW4 184 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 HELTA6NFD8 242 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 NAGAP17050 411 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 ALOX5APP20292 161 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 NOVA1P51513 510 aaKnown RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 THEM4Q5T1C6 240 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 DGAT2L6Q6ZPD8 337 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 CCDC190Q86UF4 302 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF486Q96H40 463 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-201ENST00000356083 SLC25A22Q9H936 323 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 IL37Q9NZH6 218 aa15.78■□□□□ 0.12
COL27A1-201ENST00000356083 MS4A18H0YCH9 400 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 K7EQS6 105 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 KEAP1Q14145 624 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 MS4A18Q3C1V0 323 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 OR13H1Q8NG92 308 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 OR4C5Q8NGB2 326 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 FITM1A5D6W6 292 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 ADAM10O14672 748 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 HSD17B1P14061 328 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 MRPS10P82664 201 aaKnown RBP15.77■□□□□ 0.12
COL27A1-201ENST00000356083 TAGLNQ01995 201 aaKnown RBP15.77■□□□□ 0.12
COL27A1-201ENST00000356083 ACOT6Q3I5F7 207 aaPredicted RBP15.77■□□□□ 0.12
COL27A1-201ENST00000356083 WDTC1Q8N5D0 677 aa15.77■□□□□ 0.12
COL27A1-201ENST00000356083 PCYT2Q99447 389 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms