RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HYAL4Q2M3T9 481 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ZNF626Q68DY1 528 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 WBP2NLQ6ICG8 309 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 DRAM2Q6UX65 266 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SDR9C7Q8NEX9 313 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OR8D4Q8NGM9 314 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SMOC2Q9H3U7 446 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 IL21Q9HBE4 155 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 B3GALT5Q9Y2C3 310 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TCRBV5S4A2TA0A5A2 114 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MAP1LC3B2A6NCE7 125 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OR4C45A6NMZ5 311 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SLC10A3P09131 477 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 IL2RGP31785 369 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TAF10Q12962 218 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 NCBP2-AS2Q69YL0 99 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TMEM81Q6P7N7 255 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SERINC5Q86VE9 423 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ACOT4Q8N9L9 421 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OR51A4Q8NGJ6 313 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TMEM19Q96HH6 336 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MAP1LC3BQ9GZQ8 125 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MARCH4Q9P2E8 410 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 FZD1Q9UP38 647 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MRPS2Q9Y399 296 aaKnown RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 TTC28Q96AY4 2481 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 FAM155AB1AL88 458 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 EOMESO95936 686 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 LCATP04180 440 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ZNF8P17098 575 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 UBE2MP61081 183 aaKnown RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 KLRB1Q12918 225 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CLEC12BQ2HXU8 276 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CPZQ66K79 652 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PARM1Q6UWI2 310 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TFAP2EQ6VUC0 442 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CTSFQ9UBX1 484 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CLDN16Q9Y5I7 305 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 WSB1Q9Y6I7 421 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PRR36Q9H6K5 1346 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 RICTORQ6R327 1708 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CD163L1Q9NR16 1453 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 KIR2DS1A0A191URI9 304 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 BLACEA4D250 179 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ARPC3O15145 178 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 GPR37L1O60883 481 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 COX6CP09669 75 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 HTR1DP28221 377 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 KIR2DS4P43632 304 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 GZMKP49863 264 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 FOXK1P85037 733 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 KIR2DS1Q14954 304 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 RAET1LQ5VY80 246 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 BVESQ8NE79 360 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 OR51A2Q8NGJ7 313 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 PCED1BQ96HM7 432 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 NECTIN4Q96NY8 510 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 LMF2Q9BU23 707 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 OSBPL2Q9H1P3 480 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 HEYLQ9NQ87 328 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 LDB2O43679 373 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 LGALS2P05162 132 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ITGB7P26010 798 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 UBE2NP61088 152 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 AWAT1Q58HT5 328 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 RPS27LQ71UM5 84 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 ZNF516Q92618 1163 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ANGPTL4Q9BY76 406 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 SHARPINQ9H0F6 387 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 GNB4Q9HAV0 340 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 GOLGA2P5Q9HBQ8 144 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 KIAA1551Q9HCM1 1747 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 METTL1Q9UBP6 276 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 CD207Q9UJ71 328 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 CXorf65A6NEN9 183 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 RRP8O43159 456 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 ARRB1P49407 418 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 FAM182AQ5T1J6 154 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 TMEM251Q8N6I4 163 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 IL22RA1Q8N6P7 574 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 SLC35E1Q96K37 410 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 OR6C1Q96RD1 312 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 HSD17B14Q9BPX1 270 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ABHD16BQ9H3Z7 469 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 Q9N2K0 584 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 DIMT1Q9UNQ2 313 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 TNS2Q63HR2 1409 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 CCL15-CCL14A0A0B4J2E2 113 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 FZD6O60353 706 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 FAM163BP0C2L3 166 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 HHEXQ03014 270 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 AESQ08117 197 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 FOXB2Q5VYV0 432 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 PSRC1Q6PGN9 363 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 ZNF600Q6ZNG1 722 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 RNF113BQ8IZP6 322 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 FOXJ2Q9P0K8 574 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 GNG12Q9UBI6 72 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms