RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ARF6P62330 175 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 PRB3Q04118 309 aaPredicted RBP13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 CLEC12AQ5QGZ9 265 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 VASH1Q7L8A9 365 aaPredicted RBP13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 FUNDC1Q8IVP5 155 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 SLC30A8Q8IWU4 369 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 OR13G1Q8NGZ3 307 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 TMEM255BQ8WV15 326 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 SGCDQ92629 289 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 MPP4Q96JB8 637 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 DPAGT1Q9H3H5 408 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 TXNIPQ9H3M7 391 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 POLE4Q9NR33 117 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 TUBG2Q9NRH3 451 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 VPREB3Q9UKI3 123 aa13.48□□□□□ -0.25
NECTIN1-202ENST00000340882 LRRC30A6NM36 301 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 UBDO15205 165 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 DBHP09172 617 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 CD247P20963 164 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 MAB21L1Q13394 359 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 METTL11BQ5VVY1 283 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 Q6ZTK2 550 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 SYT9Q86SS6 491 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 IGFN1Q86VF2 1251 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 C1orf87Q8N0U7 546 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 BHLHE23Q8NDY6 225 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 CFHR4Q92496 578 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 PHF21AQ96BD5 680 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 ZBTB9Q96C00 473 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 SGTBQ96EQ0 304 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 ALG12Q9BV10 488 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 PCDHAC1Q9H158 963 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 ZNRD1Q9P1U0 126 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 FBLN5Q9UBX5 448 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 GMEB1Q9Y692 573 aa13.47□□□□□ -0.25
NECTIN1-202ENST00000340882 NPIPB13A6NJU9 1138 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 C12orf71A8MTZ7 269 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 NPIPB4C9JG80 1138 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 SGCEO43556 437 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 FAM20BO75063 409 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 SNNO75324 88 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 LIPFP07098 398 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 DLX1P56177 255 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 MPPED2Q15777 294 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 PRAMEF6Q5VXH4 476 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 CD276Q5ZPR3 534 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 SFRP4Q6FHJ7 346 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 FBXW12Q6X9E4 464 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 C1orf122Q6ZSJ8 110 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 FGFRL1Q8N441 504 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 PPP1R35Q8TAP8 253 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 LRTOMTQ8WZ04 291 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 RBP7Q96R05 134 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 PAIP2Q9BPZ3 127 aaKnown RBP13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 MMADHCQ9H3L0 296 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 STX18Q9P2W9 335 aaKnown RBP13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 USH1CQ9Y6N9 552 aa13.46□□□□□ -0.25
NECTIN1-202ENST00000340882 RYR2Q92736 4967 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 H7C1C5 153 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 TGFBR2P37173 567 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 NPY4RP50391 375 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 EFNB2P52799 333 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 RPL27P61353 136 aaKnown RBP13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 LCN6P62502 163 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 LIPHQ8WWY8 451 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 ZNF582Q96NG8 517 aaPredicted RBP13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 CPPED1Q9BRF8 314 aaPredicted RBP13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 PPA2Q9H2U2 334 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 WDR76Q9H967 626 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 UFSP2Q9NUQ7 469 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 ERVK-18Q9QC07 812 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 BIRC6Q9NR09 4857 aa13.45□□□□□ -0.26
NECTIN1-202ENST00000340882 A0A1B0GWJ7 208 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 GMNCA6NCL1 334 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 K7EIL1 84 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 FBP2O00757 339 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 OR10H3O60404 316 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 MPIG6BO95866 241 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 PPIBP23284 216 aaKnown RBP13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 GABRA5P31644 462 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 GATA4P43694 442 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 CRYBA2P53672 197 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 RAD23AP54725 363 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 CCDC92Q53HC0 331 aaPredicted RBP13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 ALG10Q5BKT4 473 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 FOXB2Q5VYV0 432 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 BLOC1S3Q6QNY0 202 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 VMO1Q7Z5L0 202 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 PNLDC1Q8NA58 520 aaKnown RBP13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 LRRC75AQ8NAA5 344 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 Q8TCH9 128 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 TAMM41Q96BW9 452 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 FAM96BQ9Y3D0 163 aa13.44□□□□□ -0.26
NECTIN1-202ENST00000340882 A0A1W2PRD5 423 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 A0A1W2PRF3 423 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 A0A1W2PRM7 423 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 OR6C6A6NF89 314 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 IQCF6A8MYZ5 107 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 ADAM20O43506 726 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms