RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 AMDHD2Q9Y303 409 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF462Q96JM2 2506 aa12.7□□□□□ -0.38
NIPAL3-202ENST00000339255 CCRL2O00421 344 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 WNT11O96014 354 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 CD79AP11912 226 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 CD53P19397 219 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 GNLYP22749 145 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 OTX1P32242 354 aaPredicted RBP12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 RGS6P49758 472 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 ASCL1P50553 236 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 MMP16P51512 607 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 PSMA6P60900 246 aaKnown RBP12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 PSG4Q00888 419 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 FBXL19-AS1Q494R0 122 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 CCDC92Q53HC0 331 aaPredicted RBP12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 PABPC1L2AQ5JQF8 200 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 SPATC1Q76KD6 591 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 OR1F12Q8NHA8 337 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 PRR7Q8TB68 274 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 LRRC46Q96FV0 321 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 CCDC120Q96HB5 630 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 KCNJ15Q99712 375 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 WNT5BQ9H1J7 359 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 MOB1AQ9H8S9 216 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 NDUFB11Q9NX14 153 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 B3GNT2Q9NY97 397 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 NDUFA13Q9P0J0 144 aa12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 ERRFI1Q9UJM3 462 aaPredicted RBP12.69□□□□□ -0.38
NIPAL3-202ENST00000339255 IQCMA0A1B0GVH7 501 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 MAGEB4O15481 346 aaPredicted RBP12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 LRRTM2O43300 516 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 PLPP2O43688 288 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 RPP14O95059 124 aaKnown RBP12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 LALBAP00709 142 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 CD1AP06126 327 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 CELP19835 753 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 HTR5AP47898 357 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 CCR9P51686 369 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 RAB1AP62820 205 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 CDK5R1Q15078 307 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 TSTQ16762 297 aaKnown RBP12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 TIMM23BQ5SRD1 257 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 ZNF774Q6NX45 483 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 SATL1Q86VE3 508 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 LIX1LQ8IVB5 337 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 PHC2Q8IXK0 858 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 FAM169BQ8N8A8 192 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 SMIM19Q96E16 107 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 R4GMQ9 66 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 MYO18BQ8IUG5 2567 aa12.68□□□□□ -0.38
NIPAL3-202ENST00000339255 SMIM31A0A1B0GVY4 71 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 ACOD1A6NK06 481 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 OGG1O15527 345 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 GPRIN2O60269 458 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 PRB1P04280 392 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 PATE4P0C8F1 98 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 AGAP20933 346 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 CRYGSP22914 178 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 PSMA1P25786 263 aaKnown RBP12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 LIPAP38571 399 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 DOC2BQ14184 412 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 IGFBP7Q16270 282 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 LIPKQ5VXJ0 399 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 DMKNQ6E0U4 476 aaPredicted RBP12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 OR2G2Q8NGZ5 317 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 LILRB4Q8NHJ6 448 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 AKR7LQ8NHP1 331 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 RPS4Y2Q8TD47 263 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 DOK1Q99704 481 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 SP140LQ9H930 580 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 ST6GALNAC2Q9UJ37 374 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 TRBV2A0A0J9YWF9 115 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 TMEM212A6NML5 194 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 E9PI62 339 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 LOC110117498-PIK3R3F6TDL0 507 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 C16orf97H3BN30 126 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 C1QL1O75973 258 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 CD36P16671 472 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 GABRA5P31644 462 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 UGT2B10P36537 528 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 UQCRFS1P47985 274 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 GTF2A1P52655 376 aaPredicted RBP12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 TPTEP56180 551 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 TRAM1Q15629 374 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 KRTAP27-1Q3LI81 207 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 SOWAHCQ53LP3 525 aaPredicted RBP12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 DRAM2Q6UX65 266 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 MDP1Q86V88 176 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 FGFBP3Q8TAT2 258 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 CA5BP1Q8WTZ4 195 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 TMIGD2Q96BF3 282 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 MUCL1Q96DR8 90 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 C4orf45Q96LM5 186 aa12.67□□□□□ -0.38
NIPAL3-202ENST00000339255 ANKHD1Q8IWZ3 2542 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 HEATR1Q9H583 2144 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-202ENST00000339255 PRR14LQ5THK1 2151 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms