RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 AQP6Q13520 282 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 ZMYND11Q15326 602 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 FAM201AQ5SY85 155 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 HIST2H3PS2Q5TEC6 136 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 HIST2H3AQ71DI3 136 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 CPLX4Q7Z7G2 160 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 PEG10Q86TG7 708 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 OR2V2Q96R30 315 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 SIGLEC11Q96RL6 698 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC6A7Q99884 636 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 PCDHB10Q9UN67 800 aa11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 SAMD4AQ9UPU9 718 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
NUDCD3-201ENST00000338427 A0A0G2JMP0 313 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 A0A0X1KG70 313 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 C5orf63A6NC05 138 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 ARPC2O15144 300 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 OR10H3O60404 316 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 CYB5R3P00387 301 aaPredicted RBP11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 RRM2P31350 389 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 RPS27P42677 84 aaKnown RBP11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 CFAP77Q6ZQR2 320 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 LRRC28Q86X40 367 aaPredicted RBP11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 BCL6BQ8N143 479 aaPredicted RBP11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNF283Q8N7M2 679 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 BHLHE23Q8NDY6 225 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 OR4M2Q8NGB6 313 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 OR10AD1Q8NGE0 317 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 DIRC2Q96SL1 478 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 WACQ9BTA9 647 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 IFT27Q9BW83 186 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 C1QTNF5Q9BXJ0 243 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 EGLN3Q9H6Z9 239 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 ESM1Q9NQ30 184 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 RPRD1BQ9NQG5 326 aaKnown RBP11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 PPP1R3CQ9UQK1 317 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 POLR1DQ9Y2S0 133 aa11.25□□□□□ -0.61
NUDCD3-201ENST00000338427 TVP23AA6NH52 213 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 F5H5K5 113 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 F5H5P2 479 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 H3BSA7 217 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 MLNRO43193 412 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 HLA-DPB1P04440 258 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 HSD17B1P14061 328 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 RAC2P15153 192 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 PYCR1P32322 319 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC6A9P48067 706 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 GSSP48637 474 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 GNGT1P63211 74 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC3A1Q07837 685 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 CLEC12AQ5QGZ9 265 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 LYPD4Q6UWN0 246 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 CYP2R1Q6VVX0 501 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 C1QL2Q7Z5L3 287 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 JAZF1Q86VZ6 243 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 DEFB107AQ8IZN7 70 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 CYB561A3Q8NBI2 242 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 NPEPL1Q8NDH3 523 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 C19orf18Q8NEA5 215 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 SDR9C7Q8NEX9 313 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 GJC3Q8NFK1 279 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC26A10Q8NG04 563 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 OR52E2Q8NGJ4 325 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 FANK1Q8TC84 345 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 ST7LQ8TDW4 575 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 NSMCE2Q96MF7 247 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 PATZ1Q9HBE1 687 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 TMEM165Q9HC07 324 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 GCM1Q9NP62 436 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 MRPL22Q9NWU5 206 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 IL19Q9UHD0 177 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 TANC2Q9HCD6 1990 aa11.24□□□□□ -0.61
NUDCD3-201ENST00000338427 TMEM178BH3BS89 294 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 ARPC3O15145 178 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 RENP00797 406 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 GASTP01350 101 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 FABP3P05413 133 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 PSKH1P11801 424 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 TNFSF4P23510 183 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 CFPP27918 469 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 CRABP1P29762 137 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC6A6P31641 620 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNF362Q5T0B9 420 aaPredicted RBP11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC18B1Q6NT16 456 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 PGBD2Q6P3X8 592 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 FBXW12Q6X9E4 464 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 PIGWQ7Z7B1 504 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 ADCK1Q86TW2 530 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 MOGAT3Q86VF5 341 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 ZDHHC21Q8IVQ6 265 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 PGAM4Q8N0Y7 254 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 ZDHHC22Q8N966 263 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 DEFB108BQ8NET1 73 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 OR9Q2Q8NGE9 314 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 OR51L1Q8NGJ5 315 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 NANPQ8TBE9 248 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms