RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PARS2Q7L3T8 475 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF687Q8N1G0 1237 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 SMIM7Q9BQ49 75 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 FBXO44Q9H4M3 255 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 AGPAT4Q9NRZ5 378 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM140Q9NV12 185 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 HHLA2Q9UM44 414 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 FSCN2O14926 492 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR1E1P30953 314 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 LIMS1P48059 325 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 LINC01559Q495D7 138 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR2A2Q6IF42 318 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 MON1AQ86VX9 555 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 CNTN4Q8IWV2 1026 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 RNF148Q8N7C7 305 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR10G2Q8NGC3 310 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR4L1Q8NH43 312 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR51H1Q8NH63 302 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 RNF138Q8WVD3 245 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 ART4Q93070 314 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 HGDQ93099 445 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 CAPNS2Q96L46 248 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 DERL2Q9GZP9 239 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR51I1Q9H343 314 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 RNF167Q9H6Y7 350 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 KCNMB3Q9NPA1 279 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 BACE2Q9Y5Z0 518 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 NCOA6Q14686 2063 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 TRAV8-7A0A075B6U6 113 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 GPR39O43194 453 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 PGA4P0DJD7 388 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 PGA5P0DJD9 388 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 PCSK1P29120 753 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 CSNK1A1P48729 337 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 UBE2MP61081 183 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 MEF2AQ02078 507 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 CACNG1Q06432 222 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 KHDC3LQ587J8 217 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 Q71RC1 249 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMED6Q8WW62 240 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 HOXB13Q92826 284 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 ADAT3Q96EY9 351 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 MARCH5Q9NX47 278 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR5V1Q9UGF6 321 aa5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 DIMT1Q9UNQ2 313 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF142P52746 1687 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-201ENST00000334218 SERINC4A6NH21 518 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 GABRDO14764 452 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 DHRS3O75911 302 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SYPP08247 313 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 POLR2LP62875 67 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 PAX5Q02548 391 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLAQ13239 276 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 NSDHLQ15738 373 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 LRRC55Q6ZSA7 311 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR14A16Q8NHC5 309 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 KCNS1Q96KK3 526 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 C1orf74Q96LT6 269 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 HDHD5Q9BXW7 423 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TREX1Q9NSU2 369 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 NOTCH4Q99466 2003 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLIT3O75094 1523 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A1B0GTW7 788 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF724A8MTY0 619 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 WNT10BO00744 389 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 FCGR3BO75015 233 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CD200P41217 278 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 KIR2DL1P43626 348 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM33P57088 247 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 VWA2Q5GFL6 755 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 KLHDC7AQ5VTJ3 777 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MFSD12Q6NUT3 480 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 C11orf44Q8N8P7 122 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR2A1Q8NGT9 310 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SPATC1LQ9H0A9 340 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 DMAC2Q9NW81 257 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 F5P12259 2224 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 FTCDNL1E5RQL4 147 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 DOK2O60496 412 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 IDSP22304 550 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 RPS20P60866 119 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 VKORC1L1Q8N0U8 176 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM8AQ9HCN3 771 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MS4A12Q9NXJ0 267 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR5K3A6NET4 321 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TPP1O14773 563 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 P04436 131 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 H1F0P07305 194 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ENPP1P22413 925 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MNX1P50219 401 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SSBP2P81877 361 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SOWAHCQ53LP3 525 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CLEC1AQ8NC01 280 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ABHD5Q8WTS1 349 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 HSD17B8Q92506 261 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MIEN1Q9BRT3 115 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TSSK6Q9BXA6 273 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 PRO1933Q9H354 126 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ABHD16BQ9H3Z7 469 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OSGIN2Q9Y236 505 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms