RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PCDHGA5Q9Y5G8 931 aa12.74□□□□□ -0.37
EPHB3-201ENST00000330394 TAF1LQ8IZX4 1826 aa12.74□□□□□ -0.37
EPHB3-201ENST00000330394 TMEM218A2RU14 115 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 STMND1H3BQB6 276 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 MSTNO14793 375 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 BPNT1O95861 308 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
EPHB3-201ENST00000330394 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 LAMTOR1Q6IAA8 161 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 TMEM123Q8N131 208 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 GVQW1Q8N7I0 195 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 OR2G3Q8NGZ4 309 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 RSPRY1Q96DX4 576 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 FBXO17Q96EF6 278 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 FKRPQ9H9S5 495 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 MED29Q9NX70 200 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 KLHL13Q9P2N7 655 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 CYTIPO60759 359 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 CTAG2O75638 210 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 HTRA4P83105 476 aaPredicted RBP12.73□□□□□ -0.37
EPHB3-201ENST00000330394 SLC17A1Q14916 467 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 ELFN2Q5R3F8 820 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 DCAF12L2Q5VW00 463 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 CLEC9AQ6UXN8 241 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 NKAIN3Q8N8D7 197 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 HINT2Q9BX68 163 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 ZNF230Q9UIE0 474 aaPredicted RBP12.73□□□□□ -0.37
EPHB3-201ENST00000330394 HMSDA8MTL9 139 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 BRINP1O60477 761 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 PTAFRP25105 342 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 CASRP41180 1078 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 RPL27P61353 136 aaKnown RBP12.73□□□□□ -0.37
EPHB3-201ENST00000330394 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 RNF212Q495C1 297 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 WDR38Q5JTN6 314 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 C9orf152Q5JTZ5 239 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 ZNF595Q8IYB9 648 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 PIGCQ92535 297 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 MALSU1Q96EH3 234 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 PHOX2AO14813 284 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
EPHB3-201ENST00000330394 ZNF728P0DKX0 622 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 FASLGP48023 281 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 TMEM176BQ3YBM2 270 aaPredicted RBP12.73□□□□□ -0.37
EPHB3-201ENST00000330394 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 KCNJ15Q99712 375 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 C19orf43Q9BQ61 176 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 OR51B6Q9H340 312 aa12.73□□□□□ -0.37
EPHB3-201ENST00000330394 ADAP1O75689 374 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 JTBO76095 146 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 IGHG1P01857 330 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 CDKN2AP42771 156 aaKnown RBP12.72□□□□□ -0.37
EPHB3-201ENST00000330394 ASCL1P50553 236 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 PRTGQ2VWP7 1150 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 RFLNBQ8N5W9 214 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 BADQ92934 168 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 ABHD6Q9BV23 337 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 LTBP4Q8N2S1 1624 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 LY75O60449 1722 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 CENPVL1A0A0U1RR11 272 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 LILRB5O75023 590 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 AKR7A3O95154 331 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 CD96P40200 585 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 PJVKQ0ZLH3 352 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 ZNF239Q16600 458 aaKnown RBP12.72□□□□□ -0.37
EPHB3-201ENST00000330394 RNLSQ5VYX0 342 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 ZNF425Q6IV72 752 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 BCORP1Q8N888 145 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 OR11G2Q8NGC1 345 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 OR56B2PQ8NGI1 322 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 GPR119Q8TDV5 335 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 ADAMTS18Q8TE60 1221 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 LCORQ96JN0 433 aaPredicted RBP12.72□□□□□ -0.37
EPHB3-201ENST00000330394 SLC2A4RGQ9NR83 387 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 TP53I11O14683 189 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 LILRB3O75022 631 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 IL33O95760 270 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 ARG1P05089 322 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 CRYBA1P05813 215 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 CHRM2P08172 466 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 SPP1P10451 314 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 HNRNPKP61978 463 aaKnown RBP eCLIP12.72□□□□□ -0.37
EPHB3-201ENST00000330394 SLC37A2Q8TED4 501 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 RBMXL1Q96E39 390 aaKnown RBP12.72□□□□□ -0.37
EPHB3-201ENST00000330394 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 SF3B6Q9Y3B4 125 aaKnown RBP12.72□□□□□ -0.37
EPHB3-201ENST00000330394 PPIL1Q9Y3C6 166 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 PIAS3Q9Y6X2 628 aa12.72□□□□□ -0.37
EPHB3-201ENST00000330394 COL11A2P13942 1736 aaPredicted RBP12.72□□□□□ -0.37
EPHB3-201ENST00000330394 CTHP32929 405 aa12.71□□□□□ -0.37
EPHB3-201ENST00000330394 CSNK1A1P48729 337 aa12.71□□□□□ -0.37
EPHB3-201ENST00000330394 F2RL1P55085 397 aa12.71□□□□□ -0.37
EPHB3-201ENST00000330394 DUSP2Q05923 314 aa12.71□□□□□ -0.37
EPHB3-201ENST00000330394 AGBL4Q5VU57 503 aa12.71□□□□□ -0.37
EPHB3-201ENST00000330394 HGDQ93099 445 aa12.71□□□□□ -0.37
EPHB3-201ENST00000330394 SPTSSAQ969W0 71 aa12.71□□□□□ -0.37
EPHB3-201ENST00000330394 CPNE4Q96A23 557 aaPredicted RBP12.71□□□□□ -0.37
EPHB3-201ENST00000330394 USB1Q9BQ65 265 aaKnown RBP12.71□□□□□ -0.37
EPHB3-201ENST00000330394 ZNF2Q9BSG1 426 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms