RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 THEM6Q8WUY1 208 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 AP3S1Q92572 193 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 TMEM45BQ96B21 275 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF775Q96BV0 537 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 PRRG4Q9BZD6 226 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 NIPAL2Q9H841 368 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 GP6Q9HCN6 339 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 HMG20AQ9NP66 347 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 PARPBPQ9NWS1 579 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 GALNT8Q9NY28 637 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 CRIM1Q9NZV1 1036 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 EMC3Q9P0I2 261 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 MCTS1Q9ULC4 181 aaKnown RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 MYO9AB2RTY4 2548 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 RAMP1O60894 148 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 SLC43A1O75387 559 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 SC5DO75845 299 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ARL6IP5O75915 188 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ABHD16AO95870 558 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 MAPK3P27361 379 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 S100A5P33763 92 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 PEX19P40855 299 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 HCCSP53701 268 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 CAMK2DQ13557 499 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF829Q3KNS6 432 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 C22orf42Q6IC83 251 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 OR2A2Q6IF42 318 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ARL9Q6T311 187 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 FCRLAQ7L513 359 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 FAM214BQ7L5A3 538 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 NUFIP2Q7Z417 695 aaKnown RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 OR6N1Q8NGY5 312 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 OR52N5Q8NH56 324 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ABHD4Q8TB40 342 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 RNF128Q8TEB7 428 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 GHSRQ92847 366 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 TMEM203Q969S6 136 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 MCHR2Q969V1 340 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 SLC25A46Q96AG3 418 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 PGLYRP3Q96LB9 341 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 OR2M2Q96R28 347 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 WACQ9BTA9 647 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 EMC6Q9BV81 110 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 TMED9Q9BVK6 235 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 RBM24Q9BX46 236 aaKnown RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 WDR12Q9GZL7 423 aaKnown RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 PALMDQ9NP74 551 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 MRM2Q9UI43 246 aaKnown RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 IKZF2Q9UKS7 526 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ROS1P08922 2347 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 VPS13CQ709C8 3753 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 TMEM212A6NML5 194 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 SS18L1O75177 396 aaPredicted RBP14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 CRHP06850 196 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 QDPRP09417 244 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 SPARCP09486 303 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 NTF4P34130 210 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 GDI2P50395 445 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF84P51523 738 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 RIDAP52758 137 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 ALKBH1Q13686 389 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 EIF2B1Q14232 305 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 RNPS1Q15287 305 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 LIPNQ5VXI9 398 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 FOXL2NBQ6ZUU3 175 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 KRT77Q7Z794 578 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 TUSC5Q8IXB3 177 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 C20orf196Q8IYI0 205 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 TMEM123Q8N131 208 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 OR6Q1Q8NGQ2 317 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 COMMD4Q9H0A8 199 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 PLGRKTQ9HBL7 147 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF281Q9Y2X9 895 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 FLVCR1Q9Y5Y0 555 aa14.43□□□□□ -0.1
PDLIM1-201ENST00000329399 ALPK2Q86TB3 2170 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 CELSR1Q9NYQ6 3014 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 TRAV1-2A0A0B4J238 106 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 PNMA8CA0A1B0GUJ8 204 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 IQCMA0A1B0GVH7 501 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF716A6NP11 495 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 E9PI62 339 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 MSTNO14793 375 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 UPK3AO75631 287 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 NPR2P20594 1047 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 MYL9P24844 172 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 RPS19P39019 145 aaKnown RBP14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 SLC3A1Q07837 685 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 DCTN2Q13561 401 aaKnown RBP14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 ETFDHQ16134 617 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 LYPD4Q6UWN0 246 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 ZFP41Q8N8Y5 198 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 ZIC4Q8N9L1 334 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 OR2AJ1Q8NGZ0 328 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 NSMAFQ92636 917 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 GMPPAQ96IJ6 420 aaPredicted RBP14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 HDHD5Q9BXW7 423 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 PIGMQ9H3S5 423 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 C1orf198Q9H425 327 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 PLSCR4Q9NRQ2 329 aa14.42□□□□□ -0.1
PDLIM1-201ENST00000329399 ACOXLQ9NUZ1 547 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms