RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 SSBP3Q9BWW4 388 aaPredicted RBP21.03■□□□□ 0.96
PPP4R4-202ENST00000328839 NMNAT1Q9HAN9 279 aaPredicted RBP21.03■□□□□ 0.96
PPP4R4-202ENST00000328839 LRCH1Q9Y2L9 728 aa21.03■□□□□ 0.96
PPP4R4-202ENST00000328839 IGHV3-64DA0A0J9YX35 117 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 IMPA2O14732 288 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 RER1O15258 196 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 RGS6P49758 472 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 SLC7A2P52569 658 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 LSM6P62312 80 aaKnown RBP21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 SLC27A4Q6P1M0 643 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 OR52E2Q8NGJ4 325 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 OR5L1Q8NGL2 311 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 FAM162AQ96A26 154 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 SLC25A28Q96A46 364 aa21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 C1orf147Q96MC9 270 aaPredicted RBP21.02■□□□□ 0.96
PPP4R4-202ENST00000328839 MGAM2Q2M2H8 2515 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 CYB5R3P00387 301 aaPredicted RBP21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 SRP9P49458 86 aaKnown RBP21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 FGD3Q5JSP0 725 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 GPR139Q6DWJ6 353 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 BTNL3Q6UXE8 466 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 PARP8Q8N3A8 854 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 BHLHE23Q8NDY6 225 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 OR8G5Q8NG78 346 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 OR13G1Q8NGZ3 307 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 SLC7A13Q8TCU3 470 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 MEGF10Q96KG7 1140 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 ZNF582Q96NG8 517 aaPredicted RBP21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 NUAK2Q9H093 628 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 ANKRD19PQ9H560 264 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 IER3IP1Q9Y5U9 82 aa21.01■□□□□ 0.95
PPP4R4-202ENST00000328839 H0YL77 283 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 J3QW42 95 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 IFNL4K9M1U5 179 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 NME4O00746 187 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 GPANK1O95872 356 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 WNT2P09544 360 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 CD80P33681 288 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 GNB2P62879 340 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 TUSC1Q2TAM9 212 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 PRR31Q5SQ13 230 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 FBXW12Q6X9E4 464 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 JAZF1Q86VZ6 243 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 RP9Q8TA86 221 aaKnown RBP21■□□□□ 0.95
PPP4R4-202ENST00000328839 APOBEC3DQ96AK3 386 aaPredicted RBP21■□□□□ 0.95
PPP4R4-202ENST00000328839 RSRC1Q96IZ7 334 aaKnown RBP21■□□□□ 0.95
PPP4R4-202ENST00000328839 UNKLQ9H9P5 680 aaKnown RBP21■□□□□ 0.95
PPP4R4-202ENST00000328839 NRIP3Q9NQ35 241 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 VSX1Q9NZR4 365 aaPredicted RBP21■□□□□ 0.95
PPP4R4-202ENST00000328839 SIGLEC7Q9Y286 467 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 ENPP4Q9Y6X5 453 aa21■□□□□ 0.95
PPP4R4-202ENST00000328839 SLC22A2O15244 555 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 SASH3O75995 380 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 H1F0P07305 194 aaKnown RBP20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 IGHV4-38-2P0DP08 117 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 NCK1P16333 377 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 PAX8Q06710 450 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 MEP1BQ16820 701 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 PTCHD4Q6ZW05 846 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 ADCK1Q86TW2 530 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 MOGAT3Q86VF5 341 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 KLBQ86Z14 1044 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 WDR76Q9H967 626 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 ATPIF1Q9UII2 106 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 AURKCQ9UQB9 309 aa20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 FAM32AQ9Y421 112 aaKnown RBP20.99■□□□□ 0.95
PPP4R4-202ENST00000328839 F5H5P2 479 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 KCNAB3O43448 404 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 PTP4A3O75365 173 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 RNASE1P07998 156 aaKnown RBP20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 COX4I1P13073 169 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 MTNR1AP48039 350 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 GSK3BP49841 420 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 LRRN1Q6UXK5 716 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 GJC3Q8NFK1 279 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 PLEKHA8Q96JA3 519 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 TSSK2Q96PF2 358 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 GPX7Q96SL4 187 aaPredicted RBP20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 ZNF696Q9H7X3 374 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 TMEM165Q9HC07 324 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 MIOXQ9UGB7 285 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 RPS6KA6Q9UK32 745 aa20.98■□□□□ 0.95
PPP4R4-202ENST00000328839 TRAV40A0A0B4J280 105 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 LRRC30A6NM36 301 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 H2AFXP16104 143 aaPredicted RBP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 CDKN2AP42771 156 aaKnown RBP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 RPS6KA3P51812 740 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 SLC9A3R2Q15599 337 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 DNM1P34Q6PK57 102 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 CORO6Q6QEF8 472 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 TSEN54Q7Z6J9 526 aaKnown RBP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 TAF15Q92804 592 aaKnown RBP eCLIP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 NEIL1Q96FI4 390 aaPredicted RBP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 COQ7Q99807 217 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 HOPXQ9BPY8 73 aaPredicted RBP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 KCTD14Q9BQ13 255 aaPredicted RBP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 TMEM246Q9BRR3 403 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 HDHD2Q9H0R4 259 aa20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 KRCC1Q9NPI7 259 aaPredicted RBP20.97■□□□□ 0.95
PPP4R4-202ENST00000328839 SOX21Q9Y651 276 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms