RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TIMM8BQ9Y5J9 83 aaPredicted RBP10.32□□□□□ -0.76
COL4A5-201ENST00000328300 SCN1AP35498 2009 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF816-ZNF321PA0A0X1KG74 233 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 A0A1B0GV50 99 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 A0A1W2PNR3 127 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 CEBPZOSA8MTT3 80 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 GREM1O60565 184 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 EPHA1P21709 976 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 OR8B8Q15620 311 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 TATDN3Q17R31 274 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 GPR157Q5UAW9 335 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 USP51Q70EK9 711 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 CD163Q86VB7 1156 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 TMEM185AQ8NFB2 350 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 OR51D1Q8NGF3 324 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 ALDH3B1P43353 468 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 HEPHL1Q6MZM0 1159 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 MDGA2Q7Z553 956 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 SIGLEC7Q9Y286 467 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 IFNA4P05014 189 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 GSTP1P09211 210 aaKnown RBP10.32□□□□□ -0.76
COL4A5-201ENST00000328300 ASAH1Q13510 395 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 DRAM2Q6UX65 266 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 OR8B4Q96RC9 309 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 SSX3Q99909 188 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 NMNAT2Q9BZQ4 307 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 TRAPPC4Q9Y296 219 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 NUPL2O15504 423 aaKnown RBP10.32□□□□□ -0.76
COL4A5-201ENST00000328300 FABP1P07148 127 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 ERGP11308 486 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 NKX6-1P78426 367 aaPredicted RBP10.32□□□□□ -0.76
COL4A5-201ENST00000328300 GPNMBQ14956 572 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 NPEPL1Q8NDH3 523 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 OTOSQ8NHW6 89 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 SPSB1Q96BD6 273 aa10.32□□□□□ -0.76
COL4A5-201ENST00000328300 NAA50Q9GZZ1 169 aaKnown RBP10.32□□□□□ -0.76
COL4A5-201ENST00000328300 TNFSF11O14788 317 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 NCR1O76036 304 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 NRASP01111 189 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 ANKRD34CP0C6C1 535 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 FUT6P51993 359 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 MC2RQ01718 297 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 ZDHHC23Q8IYP9 409 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 LUZP4Q9P127 313 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 GDF2Q9UK05 429 aaPredicted RBP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 IFNA10P01566 189 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 GABRA1P14867 456 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF674Q2M3X9 581 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 FAM71CQ8NEG0 241 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 GIMAP1Q8WWP7 306 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 KISS1RQ969F8 398 aaPredicted RBP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 FOXB1Q99853 325 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 DUSP13Q9UII6 198 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 TCRBP04435 133 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 SFTPCP11686 197 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 THBS3P49746 956 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 RAB11AP62491 216 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 ACSM1Q08AH1 577 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 DYRK1AQ13627 763 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 EBPQ15125 230 aaKnown RBP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 CD276Q5ZPR3 534 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 OR2W3Q7Z3T1 314 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 FAM185AQ8N0U4 392 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 KDM8Q8N371 416 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 CISD2Q8N5K1 135 aaKnown RBP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 OR51E1Q8TCB6 317 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 YIPF6Q96EC8 236 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 TAS2R16Q9NYV7 291 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 TAS2R4Q9NYW5 299 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 ACTL6AO96019 429 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 IGHV4-34P06331 123 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 HES3Q5TGS1 186 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 OR5M1Q8NGP8 315 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 HSD17B8Q92506 261 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 PIGTQ969N2 578 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 EXOGQ9Y2C4 368 aaKnown RBP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 SIPA1L1O43166 1804 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 TIAL1Q01085 375 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL4A5-201ENST00000328300 RNLSQ5VYX0 342 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 SIGLEC11Q96RL6 698 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 EMC6Q9BV81 110 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 TMEM100Q9NV29 134 aa10.31□□□□□ -0.76
COL4A5-201ENST00000328300 BTBD17A6NE02 478 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 ZNF732B4DXR9 585 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 NGFRP08138 427 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 TIGD3Q6B0B8 471 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 B3GLCTQ6Y288 498 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 REEP6Q96HR9 211 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 SIRT3Q9NTG7 399 aaPredicted RBP10.3□□□□□ -0.76
COL4A5-201ENST00000328300 MCM3APO60318 1980 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 MSTNO14793 375 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 HBE1P02100 147 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 PTGER4P35408 488 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 MEOX1P50221 254 aa10.3□□□□□ -0.76
COL4A5-201ENST00000328300 GP2P55259 537 aaKnown RBP10.3□□□□□ -0.76
COL4A5-201ENST00000328300 RPS18P62269 152 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms