RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 BPIFA2Q96DR5 249 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 TMEM80Q96HE8 168 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 ADGRG7Q96K78 797 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF582Q96NG8 517 aaPredicted RBP5.67□□□□□ -1.5
CSTF3-201ENST00000323959 MNTQ99583 582 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 COQ7Q99807 217 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 VRK1Q99986 396 aaPredicted RBP5.67□□□□□ -1.5
CSTF3-201ENST00000323959 NEURL2Q9BR09 285 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 NMNAT2Q9BZQ4 307 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 NOX4Q9NPH5 578 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 RHCGQ9UBD6 479 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 CHRNA9Q9UGM1 479 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 OR10H1Q9Y4A9 318 aa5.67□□□□□ -1.5
CSTF3-201ENST00000323959 LHBP01229 141 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 IL12BP29460 328 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 TGFBR2P37173 567 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 PTGDSP41222 190 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 APOBEC1P41238 236 aaKnown RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 YAP1P46937 504 aaKnown RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 POLR2HP52434 150 aaKnown RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 TUBA1BP68363 451 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 PLCXD2Q0VAA5 305 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 PPP1R8Q12972 351 aaKnown RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 GINS1Q14691 196 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 LAPTM4AQ15012 233 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF829Q3KNS6 432 aaPredicted RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ALG10BQ5I7T1 473 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 NKAPLQ5M9Q1 402 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 SLC16A12Q6ZSM3 486 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 Q6ZTK2 550 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 TUBA1AQ71U36 451 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 RRM2BQ7LG56 351 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 GRINAQ7Z429 371 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF321PQ8N8H1 164 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 OR4Q3Q8NH05 313 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 OR52N1Q8NH53 320 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 GPR119Q8TDV5 335 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 TAF15Q92804 592 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 SGTBQ96EQ0 304 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF649Q9BS31 505 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 COPS4Q9BT78 406 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 MND1Q9BWT6 205 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 NXF2Q9GZY0 626 aaKnown RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 MARCH7Q9H992 704 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 NRIP3Q9NQ35 241 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 NPAP1Q9NZP6 1156 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 POMT1Q9Y6A1 747 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 EFCAB9A8MZ26 197 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ICOSLGO75144 302 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 RAB36O95755 333 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF17P17021 662 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 MAKP20794 623 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 COPZ1P61923 177 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF117Q03924 483 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 MLLT11Q13015 90 aaPredicted RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 MRPL28Q13084 256 aaKnown RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF74Q16587 644 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 C11orf88Q6PI97 169 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 DCDC5Q6ZRR9 648 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ADCK1Q86TW2 530 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 WFDC9Q8NEX5 89 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 OR52L1Q8NGH7 329 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 FANK1Q8TC84 345 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 TMEM234Q8WY98 164 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 RORBQ92753 470 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 FAM46AQ96IP4 442 aaKnown RBP5.66□□□□□ -1.5
CSTF3-201ENST00000323959 CITED4Q96RK1 184 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 OR52D1Q9H346 318 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 ERVK-18Q9QC07 812 aa5.66□□□□□ -1.5
CSTF3-201ENST00000323959 H3BMQ9 156 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 H3BSA7 217 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 CDC42EP2O14613 210 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 SEC14L5O43304 696 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 DNPH1O43598 174 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 PLPP2O43688 288 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 PRKYO43930 277 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 NDUFB2O95178 105 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 MPZL1O95297 269 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 BGLAPP02818 100 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 MT-ND2P03891 347 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 SCG5P05408 212 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 STARP49675 285 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 EIF2B2P49770 351 aaKnown RBP5.65□□□□□ -1.5
CSTF3-201ENST00000323959 ENTPD1P49961 510 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 HSF2Q03933 536 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF91Q05481 1191 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 CD226Q15762 336 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 CTF1Q16619 201 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 GPR139Q6DWJ6 353 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 FIP1L1Q6UN15 594 aaKnown RBP5.65□□□□□ -1.5
CSTF3-201ENST00000323959 APOOLQ6UXV4 268 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 OLIG3Q7RTU3 272 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 FAM122BQ7Z309 247 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 BPIFB6Q8NFQ5 453 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 CHPT1Q8WUD6 406 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 FBXO17Q96EF6 278 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 MRGPRX4Q96LA9 322 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 OR8D2Q9GZM6 311 aa5.65□□□□□ -1.5
CSTF3-201ENST00000323959 MS4A7Q9GZW8 240 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms