RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PIGMQ9H3S5 423 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 EXO5Q9H790 373 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 AKIRIN1Q9H9L7 192 aaPredicted RBP13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 OR5H14A6NHG9 310 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 GTF2F2P13984 249 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 PTGFRP43088 359 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 SNRPEP62304 92 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 MPPED2Q15777 294 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 COL13A1Q5TAT6 717 aaPredicted RBP13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 BEST3Q8N1M1 668 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 KCNRGQ8N5I3 272 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 TINAGQ9UJW2 476 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 SLC22A13Q9Y226 551 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 KNTC1P50748 2209 aa13.94□□□□□ -0.18
SHROOM1-201ENST00000319854 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 A0A1B0GW55 424 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 RNF222A6NCQ9 220 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DUX4L2P0CJ85 424 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DUX4L3P0CJ86 424 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DUX4L4P0CJ87 422 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DUX4L5P0CJ88 424 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DUX4L6P0CJ89 424 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DUX4L7P0CJ90 424 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 CXCL12P48061 93 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 UNQ6126/PRO20091Q6UXV3 157 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 OR1N1Q8NGS0 311 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF417Q8TAU3 575 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF587Q96SQ5 575 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DUX4Q9UBX2 424 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 BLOC1S1P78537 153 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 MRPS10P82664 201 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 SNTB1Q13884 538 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 GGTLC2Q14390 218 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TAF13Q15543 124 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 INPP5JQ15735 1006 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 PAN3Q58A45 887 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 NDUFAF7Q7L592 441 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 SLC16A9Q7RTY1 509 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 D2HGDHQ8N465 521 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 LRRC75AQ8NAA5 344 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 DMBX1Q8NFW5 382 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TMEM106AQ96A25 262 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF501Q96CX3 271 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 ARL5BQ96KC2 179 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TINAGL1Q9GZM7 467 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 UCK1Q9HA47 277 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 PRDM6Q9NQX0 595 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TRAV8-7A0A075B6U6 113 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TRBV23-1A0A0A0MS06 115 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 KANTRA0A1W2PQU2 76 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 EIF1AYO14602 144 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TO15178 435 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 CD96P40200 585 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 EIF1AXP47813 144 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 ARRB1P49407 418 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 PLEKHN1Q494U1 663 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 H3F3CQ6NXT2 135 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF574Q6ZN55 896 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TMED4Q7Z7H5 227 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TSEN15Q8WW01 171 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 HLA-CQ95604 372 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 PTDSS2Q9BVG9 487 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 LAT2Q9GZY6 243 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 TNFSF18Q9UNG2 199 aa13.93□□□□□ -0.18
SHROOM1-201ENST00000319854 A0A0D9SG52 128 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 NDUFS6O75380 124 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 WNT11O96014 354 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 IFI6P09912 130 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 GIMD1P0DJR0 217 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 PGCP20142 388 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 HAAOP46952 286 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 CAPZA2P47755 286 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 FMODQ06828 376 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 CCDC157Q569K6 752 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 STEAP2Q8NFT2 490 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 INTS14Q96SY0 518 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 ELOVL3Q9HB03 270 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 SUSD2Q9UGT4 822 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 ARID1AO14497 2285 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 HEXBP07686 556 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 OR4E1P0C645 316 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 CCKBRP32239 447 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 PNLIPRP2P54317 469 aa13.92□□□□□ -0.18
SHROOM1-201ENST00000319854 TSPAN2O60636 221 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 UPK3AO75631 287 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 TACSTD2P09758 323 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 CALCBP10092 127 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 LIPCP11150 499 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 CTLA4P16410 223 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 RNF4P78317 190 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 FOXK1P85037 733 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 PDZK1IP1Q13113 114 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ALKBH1Q13686 389 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 OR7A5Q15622 319 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 SLC35D3Q5M8T2 416 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 GLT8D1Q68CQ7 371 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 LINC00346Q8IVM7 164 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 CCDC36Q8IYA8 594 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ARMC10Q8N2F6 343 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms