RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 SYNPRQ8TBG9 265 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 UBTD2Q8WUN7 234 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 OR14A2Q96R54 314 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 MICU1Q9BPX6 476 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 UTP23Q9BRU9 249 aaKnown RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 ASCL3Q9NQ33 180 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 OR2S2Q9NQN1 319 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 TAC3Q9UHF0 121 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 FBXL4Q9UKA2 621 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 RNASET2O00584 256 aaKnown RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 IFNA17P01571 189 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 CD74P04233 296 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 ITGA5P08648 1049 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 PGAM2P15259 253 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 RAB4AP20338 218 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 TSPAN31Q12999 210 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF345Q14585 488 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 PWWP2BQ6NUJ5 590 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 PXKQ7Z7A4 578 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 SPACA3Q8IXA5 215 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 CDK20Q8IZL9 346 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 OR56B1Q8NGI3 324 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 PHYHIPQ92561 330 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 MVB12AQ96EY5 273 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF350Q9GZX5 532 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 IL17BQ9UHF5 180 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 ATG4BQ9Y4P1 393 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 PTPRBP23467 1997 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF106Q9H2Y7 1883 aaKnown RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 CFAP46Q8IYW2 2715 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 STK17BO94768 372 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 SFTPBP07988 381 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 RNH1P13489 461 aaKnown RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 WT1P19544 449 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 GPR4P46093 362 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 MECP2P51608 486 aaKnown RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 CAV2P51636 162 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 TRA2AQ13595 282 aaKnown RBP eCLIP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 DCAF12Q5T6F0 453 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 SZRD1Q7Z422 152 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 FAM219AQ8IW50 185 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 INO80EQ8NBZ0 244 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 OR5K2Q8NHB8 316 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 NUDCD2Q8WVJ2 157 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 PGLYRP3Q96LB9 341 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 LINC00615Q96LM1 132 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-201ENST00000318023 TAAR9Q96RI9 348 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 FLNBO75369 2602 aaKnown RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 MASP2O00187 686 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 PSMD9O00233 223 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SURF4O15260 269 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 FRS3O43559 492 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 ALOX12BO75342 701 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SBK2P0C263 348 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 HTR1FP30939 366 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 ZIC1Q15915 447 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 PRSS53Q2L4Q9 553 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 ARHGAP11AQ6P4F7 1023 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 IL34Q6ZMJ4 242 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 HIST2H3AQ71DI3 136 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 GLB1L2Q8IW92 636 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 LRRC56Q8IYG6 542 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 BPIFB2Q8N4F0 458 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 C19orf47Q8N9M1 422 aaKnown RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 MORN4Q8NDC4 146 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 JSRP1Q96MG2 331 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 NDC1Q9BTX1 674 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 HCAR1Q9BXC0 346 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 TMEM184BQ9Y519 407 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 LILRA5A6NI73 299 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 CPSF4LA6NMK7 179 aaKnown RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 A8MWP6 167 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 BLOC1S5-TXNDC5H3BN57 136 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 C1orf105O95561 183 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 PRB1P04280 392 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SERPINA5P05154 406 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 OR8G3PP0DMU2 310 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 APLNRP35414 380 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 ASMTP46597 345 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SULT1A1P50225 295 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 C1orf94Q6P1W5 598 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 TIPARPQ7Z3E1 657 aaKnown RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 BAP18Q8IXM2 172 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SHISA5Q8N114 240 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 RFLNBQ8N5W9 214 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SLC38A9Q8NBW4 561 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 OR6T1Q8NGN1 323 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 OR1J2Q8NGS2 313 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 NEIL2Q969S2 332 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 PIK3IP1Q96FE7 263 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 TMEM208Q9BTX3 173 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SLC6A16Q9GZN6 736 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 EXOGQ9Y2C4 368 aaKnown RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 NOP16Q9Y3C1 178 aaKnown RBP8.44□□□□□ -1.06
CAPN3-201ENST00000318023 LRP4O75096 1905 aa8.44□□□□□ -1.06
CAPN3-201ENST00000318023 SCN8AQ9UQD0 1980 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 A0A087WUU8 490 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PRR19A6NJB7 356 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms