RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 ACTBP60709 375 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 ACTG1P63261 375 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 DMRTC1Q5HYR2 192 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 LURAP1LQ8IV03 231 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 BPIFB2Q8N4F0 458 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 C12orf45Q8N5I9 185 aaPredicted RBP18.62■□□□□ 0.57
RELA-201ENST00000308639 LINC00469Q8N7U9 141 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 STEAP2Q8NFT2 490 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 OR13C8Q8NGS7 320 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 SPACA5Q96QH8 159 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 FRYLO94915 3013 aa18.62■□□□□ 0.57
RELA-201ENST00000308639 B3GALNT1O75752 331 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 ZP3P21754 424 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 GK2Q14410 553 aaPredicted RBP18.61■□□□□ 0.57
RELA-201ENST00000308639 ATXN7L3Q14CW9 347 aaPredicted RBP18.61■□□□□ 0.57
RELA-201ENST00000308639 OR6M1Q8NGM8 313 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 SCARB1Q8WTV0 552 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 OIT3Q8WWZ8 545 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 IFT22Q9H7X7 185 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 PTGES2Q9H7Z7 377 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 SLC22A11Q9NSA0 550 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 ZNF736B4DX44 427 aaPredicted RBP18.61■□□□□ 0.57
RELA-201ENST00000308639 NPIPA5E9PKD4 350 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 ANOS1P23352 680 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 OR52N4Q8NGI2 321 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 ASB10Q8WXI3 467 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 MICU1Q9BPX6 476 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 WDR13Q9H1Z4 485 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 CNTD2Q9H8S5 307 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 SLC2A4RGQ9NR83 387 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 NPIPA1Q9UND3 350 aa18.61■□□□□ 0.57
RELA-201ENST00000308639 CYB5AP00167 134 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 CRABP1P29762 137 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 GNALP38405 381 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 RNF4P78317 190 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 NUDCD2Q8WVJ2 157 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 TMEM185BQ9H7F4 350 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 LDLRAD4O15165 306 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 NUPL2O15504 423 aaKnown RBP18.6■□□□□ 0.57
RELA-201ENST00000308639 KCNAB3O43448 404 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 FOXK1P85037 733 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 DHRS2Q13268 280 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 TMEM229BQ8NBD8 167 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 CHST4Q8NCG5 386 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 OR1S1Q8NH92 325 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 SOX7Q9BT81 388 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 POTEKPQ9BYX7 375 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 SHARPINQ9H0F6 387 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 SLC17A5Q9NRA2 495 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 GPR160Q9UJ42 338 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 VSIG4Q9Y279 399 aa18.6■□□□□ 0.57
RELA-201ENST00000308639 NUP62P37198 522 aaPredicted RBP18.59■□□□□ 0.57
RELA-201ENST00000308639 INPP5JQ15735 1006 aaPredicted RBP18.59■□□□□ 0.57
RELA-201ENST00000308639 C3orf33Q6P1S2 294 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 ZNF248Q8NDW4 579 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 ADAT3Q96EY9 351 aaPredicted RBP18.59■□□□□ 0.57
RELA-201ENST00000308639 C1orf198Q9H425 327 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 FGF21Q9NSA1 209 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 GDF2Q9UK05 429 aaPredicted RBP18.59■□□□□ 0.57
RELA-201ENST00000308639 SLC5A6Q9Y289 635 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 RHBDD3Q9Y3P4 386 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 COL5A1P20908 1838 aaPredicted RBP18.59■□□□□ 0.57
RELA-201ENST00000308639 ARPC4-TTLL3A0A0A6YYG9 625 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 FSTP19883 344 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 HNRNPKP61978 463 aaKnown RBP eCLIP18.59■□□□□ 0.573e-8■■■■■ 33.5
RELA-201ENST00000308639 FOXF1Q12946 379 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 FJX1Q86VR8 437 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 C5orf34Q96MH7 638 aa18.59■□□□□ 0.57
RELA-201ENST00000308639 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 IGHMP01871 453 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 H2BFMP0C1H6 154 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 TLE3Q04726 772 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 UNC119Q13432 240 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 CDNFQ49AH0 187 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 PAPD4Q6PIY7 484 aaKnown RBP18.58■□□□□ 0.57
RELA-201ENST00000308639 PAQR4Q8N4S7 273 aaPredicted RBP18.58■□□□□ 0.57
RELA-201ENST00000308639 SLC38A9Q8NBW4 561 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 MRGPRFQ96AM1 343 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 MVB12AQ96EY5 273 aa18.58■□□□□ 0.57
RELA-201ENST00000308639 USB1Q9BQ65 265 aaKnown RBP18.58■□□□□ 0.57
RELA-201ENST00000308639 A0A1B0GX78 115 aa18.58■□□□□ 0.56
RELA-201ENST00000308639 HLA-AP01891 365 aaKnown RBP18.58■□□□□ 0.56
RELA-201ENST00000308639 MPGP29372 298 aa18.58■□□□□ 0.56
RELA-201ENST00000308639 OGFOD3Q6PK18 319 aa18.58■□□□□ 0.56
RELA-201ENST00000308639 ZNF546Q86UE3 836 aa18.58■□□□□ 0.56
RELA-201ENST00000308639 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.58■□□□□ 0.56
RELA-201ENST00000308639 BEST3Q8N1M1 668 aa18.58■□□□□ 0.56
RELA-201ENST00000308639 NOP16Q9Y3C1 178 aaKnown RBP18.58■□□□□ 0.56
RELA-201ENST00000308639 TUBAL3A6NHL2 446 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 OR2T1O43869 369 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 PMS2P2O95744 297 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 SLC2A1P11166 492 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 HOXB1P14653 301 aaPredicted RBP18.57■□□□□ 0.56
RELA-201ENST00000308639 BIDP55957 195 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 GMFBP60983 142 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 HSF1Q00613 529 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 TFAP2EQ6VUC0 442 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 COX15Q7KZN9 410 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 ZNF454Q8N9F8 522 aa18.57■□□□□ 0.56
RELA-201ENST00000308639 C11orf40Q8WZ69 217 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms