RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 HIST1H2AAQ96QV6 131 aa13.96□□□□□ -0.17
LEMD3-201ENST00000308330 CACNA1EQ15878 2313 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 GEMIN2O14893 280 aaKnown RBP13.96□□□□□ -0.18
LEMD3-201ENST00000308330 LAMP1P11279 417 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 CPEP16870 476 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 OR1D4P47884 311 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 SULT1A2P50226 295 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 FOXA1P55317 472 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 NIPAL3Q6P499 406 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 SERPINA11Q86U17 422 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 ACOT4Q8N9L9 421 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 THAP4Q8WY91 577 aa13.96□□□□□ -0.18
LEMD3-201ENST00000308330 SENP5Q96HI0 755 aaPredicted RBP13.96□□□□□ -0.18
LEMD3-201ENST00000308330 MBNL1Q9NR56 388 aaKnown RBP13.96□□□□□ -0.18
LEMD3-201ENST00000308330 STRAPQ9Y3F4 350 aaKnown RBP13.96□□□□□ -0.18
LEMD3-201ENST00000308330 EPHA1P21709 976 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 TAS2R38P59533 333 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 ADAMTSL4Q6UY14 1074 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 OR1F2PQ96R84 312 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 ZPBPQ9BS86 351 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 SLC35B3Q9H1N7 401 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 DOCK1Q14185 1865 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 SYNGR4O95473 234 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 ITGB2P05107 769 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 EIF4EP06730 217 aaKnown RBP13.95□□□□□ -0.18
LEMD3-201ENST00000308330 OR4K5Q8NGD3 323 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 OR1S1Q8NH92 325 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 PPP1R1CQ8WVI7 109 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 R3HDM4Q96D70 268 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 SERINC2Q96SA4 455 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 SLC25A18Q9H1K4 315 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 FGF21Q9NSA1 209 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 COL4A1P02462 1669 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 TRBV11-1A0A0K0K1C0 115 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 TMEM202A6NGA9 273 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 GABRR3A8MPY1 467 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 SULT2B1O00204 365 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 SLC6A9P48067 706 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 TECPR1Q7Z6L1 1165 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 NUDCD2Q8WVJ2 157 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 ZNF75AQ96N20 296 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 OR8B4Q96RC9 309 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 RNF2Q99496 336 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 TLNRD1Q9H1K6 362 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 SLC26A1Q9H2B4 701 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 CNOT4O95628 575 aaKnown RBP13.95□□□□□ -0.18
LEMD3-201ENST00000308330 OR51S1Q8NGJ8 323 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 PROKR1Q8TCW9 393 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 ZDHHC8Q9ULC8 765 aa13.95□□□□□ -0.18
LEMD3-201ENST00000308330 MFNGO00587 321 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 GPRIN2O60269 458 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 SRPX2O60687 465 aaPredicted RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 IGLV3-27P01718 113 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 AMY2BP19961 511 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 PRDX3P30048 256 aaKnown RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 CHRFAM7AQ494W8 412 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 CLECL1Q8IZS7 167 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 GALNT16Q8N428 558 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 CLEC1AQ8NC01 280 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 GABARAPL1Q9H0R8 117 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 ZNF701Q9NV72 531 aaPredicted RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 SIDT1Q9NXL6 827 aaKnown RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 COL5A3P25940 1745 aaPredicted RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 C7orf66A4D0T2 115 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 HPP00738 406 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 IGLV3-25P01717 112 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 OR5G3P0C626 314 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 EPHA2P29317 976 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 HERPUD1Q15011 391 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 SLC22A6Q4U2R8 563 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 ALG10Q5BKT4 473 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 ALG10BQ5I7T1 473 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 CTSL3PQ5NE16 218 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 GCNT2Q8N0V5 402 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 OR5K2Q8NHB8 316 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 TNFRSF14Q92956 283 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 ULBP3Q9BZM4 244 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 HHATLQ9HCP6 504 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 TESQ9UGI8 421 aaKnown RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 ITGB1BP1O14713 200 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 HLA-HP01893 362 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 MBPP02686 304 aaPredicted RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 PLP1P60201 277 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 HENMT1Q5T8I9 393 aaKnown RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 ABI3BPQ7Z7G0 1075 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
LEMD3-201ENST00000308330 OR52I1Q8NGK6 324 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 NRIP2Q9BQI9 281 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 PRR14Q9BWN1 585 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 NMNAT2Q9BZQ4 307 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 LY75O60449 1722 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 M0R1X1 148 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 GPR37L1O60883 481 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 KNG1P01042 644 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 GPR18Q14330 331 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 NHLRC1Q6VVB1 395 aa13.94□□□□□ -0.18
LEMD3-201ENST00000308330 OR9A4Q8NGU2 314 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms