RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FNDC9Q8TBE3 224 aa11.77□□□□□ -0.52
TRIM35-201ENST00000305364 MMABQ96EY8 250 aaPredicted RBP11.77□□□□□ -0.52
TRIM35-201ENST00000305364 ADOQ96SZ5 270 aa11.77□□□□□ -0.52
TRIM35-201ENST00000305364 TGIF2Q9GZN2 237 aa11.77□□□□□ -0.52
TRIM35-201ENST00000305364 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.52
TRIM35-201ENST00000305364 GFOD1Q9NXC2 390 aa11.77□□□□□ -0.52
TRIM35-201ENST00000305364 DHCR7Q9UBM7 475 aaKnown RBP11.77□□□□□ -0.52
TRIM35-201ENST00000305364 TBC1D29Q9UFV1 150 aa11.77□□□□□ -0.52
TRIM35-201ENST00000305364 VSIG4Q9Y279 399 aa11.77□□□□□ -0.52
TRIM35-201ENST00000305364 FBXO7Q9Y3I1 522 aa11.77□□□□□ -0.52
TRIM35-201ENST00000305364 CRTAPO75718 401 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-201ENST00000305364 KAT7O95251 611 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 HMGN3Q15651 99 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 SPACA5Q96QH8 159 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 URGCP-MRPS24S4R325 110 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 PLXNA4Q9HCM2 1894 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 MT-ND4LP03901 98 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 CD1AP06126 327 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 ACAA1P09110 424 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-201ENST00000305364 ERGP11308 486 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-201ENST00000305364 EIF2S3P41091 472 aaKnown RBP11.77□□□□□ -0.53
TRIM35-201ENST00000305364 CX3CR1P49238 355 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 SRSF3P84103 164 aaKnown RBP11.77□□□□□ -0.53
TRIM35-201ENST00000305364 ZP2Q05996 745 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 GGTLC2Q14390 218 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 MOGAT1Q96PD6 335 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 URM1Q9BTM9 101 aaKnown RBP11.77□□□□□ -0.53
TRIM35-201ENST00000305364 NUDT9Q9BW91 350 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 TCEAL2Q9H3H9 227 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-201ENST00000305364 COA4Q9NYJ1 87 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 EHFQ9NZC4 300 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 LUZP4Q9P127 313 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 LPAR3Q9UBY5 353 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 PRODH2Q9UF12 536 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.53
TRIM35-201ENST00000305364 LOC107986453A0A1B0GWG9 222 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 OR2W5A6NFC9 320 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 OR5K4A6NMS3 321 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 LY86O95711 162 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 ALOX5APP20292 161 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 CHAF1BQ13112 559 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 LY6G6FQ5SQ64 297 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 C15orf54Q8N8G6 183 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 OR2AJ1Q8NGZ0 328 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 SLAMF9Q96A28 289 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 COX14Q96I36 57 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 UFSP2Q9NUQ7 469 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 A0A1W2PPH5 198 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 LINC01387J3KSC0 135 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 ARG1P05089 322 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 SLC35E2P0CK97 266 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 ARRB1P49407 418 aaPredicted RBP11.76□□□□□ -0.53
TRIM35-201ENST00000305364 TMEM184AQ6ZMB5 413 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 SUMF2Q8NBJ7 301 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 OR14K1Q8NGZ2 314 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 NPRL2Q8WTW4 380 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 TOLLIPQ9H0E2 274 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 FGF22Q9HCT0 170 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 RNF222A6NCQ9 220 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 SDCBPO00560 298 aaPredicted RBP11.76□□□□□ -0.53
TRIM35-201ENST00000305364 NRG2O14511 850 aaPredicted RBP11.76□□□□□ -0.53
TRIM35-201ENST00000305364 MBTPS2O43462 519 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 NR0B2Q15466 257 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 STPG1Q5TH74 334 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
TRIM35-201ENST00000305364 FBXO42Q6P3S6 717 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 KDM8Q8N371 416 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 TSTD1Q8NFU3 115 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 OR51A2Q8NGJ7 313 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 PMM1Q92871 262 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 LPAR4Q99677 370 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 UTP23Q9BRU9 249 aaKnown RBP11.76□□□□□ -0.53
TRIM35-201ENST00000305364 B9D1Q9UPM9 204 aa11.76□□□□□ -0.53
TRIM35-201ENST00000305364 MRPS2Q9Y399 296 aaKnown RBP11.76□□□□□ -0.53
TRIM35-201ENST00000305364 CPED1A4D0V7 1026 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 NKX6-1P78426 367 aaPredicted RBP11.75□□□□□ -0.53
TRIM35-201ENST00000305364 MESP2Q0VG99 397 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 SOHLH1Q5JUK2 328 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 ANGPTL5Q86XS5 388 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 HSD17B11Q8NBQ5 300 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 ADAD2Q8NCV1 583 aaKnown RBP11.75□□□□□ -0.53
TRIM35-201ENST00000305364 OR9K2Q8NGE7 335 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 TOMM40LQ969M1 308 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 SLC17A5Q9NRA2 495 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 UBQLN4Q9NRR5 601 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 HELZP42694 1942 aaKnown RBP11.75□□□□□ -0.53
TRIM35-201ENST00000305364 ZNF264O43296 627 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 CTSVO60911 334 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 ICOSLGO75144 302 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 UPK3AO75631 287 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 DUS4LO95620 317 aaKnown RBP11.75□□□□□ -0.53
TRIM35-201ENST00000305364 PNLIPRP2P54317 469 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 CORO6Q6QEF8 472 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 MED25Q71SY5 747 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
TRIM35-201ENST00000305364 OTOSQ8NHW6 89 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms