RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LRRC18Q8N456 261 aa19.64■□□□□ 0.74
SMAD1-201ENST00000302085 TMEM178AQ8NBL3 297 aa19.64■□□□□ 0.74
SMAD1-201ENST00000302085 CRLF2Q9HC73 371 aa19.64■□□□□ 0.74
SMAD1-201ENST00000302085 NCOA6Q14686 2063 aaPredicted RBP19.64■□□□□ 0.74
SMAD1-201ENST00000302085 IGKV3D-15A0A087WSY6 115 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 ANXA2P2A6NMY6 339 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 LMX1BO60663 402 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 ANXA2P07355 339 aaKnown RBP19.64■□□□□ 0.73
SMAD1-201ENST00000302085 UBCP0CG48 685 aaKnown RBP19.64■□□□□ 0.73
SMAD1-201ENST00000302085 IGFBP3P17936 291 aaPredicted RBP19.64■□□□□ 0.73
SMAD1-201ENST00000302085 PITPNBP48739 271 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 BCAP31P51572 246 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 PSMA6P60900 246 aaKnown RBP19.64■□□□□ 0.73
SMAD1-201ENST00000302085 HIST1H3AP68431 136 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 DEFB109BQ30KR1 87 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 HIST2H3PS2Q5TEC6 136 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 IGFL2Q6UWQ7 119 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 HIST2H3AQ71DI3 136 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 OR13C3Q8NGS6 347 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 CMTM3Q96MX0 182 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 LIN7BQ9HAP6 207 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 OR5V1Q9UGF6 321 aa19.64■□□□□ 0.73
SMAD1-201ENST00000302085 DMXL1Q9Y485 3027 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 ZNF891A8MT65 544 aaPredicted RBP19.63■□□□□ 0.73
SMAD1-201ENST00000302085 ASAH1Q13510 395 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 FAM27BQ5VT28 67 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 TMEM45BQ96B21 275 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 ABHD1Q96SE0 405 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 TAS2R4Q9NYW5 299 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 NUFIP1Q9UHK0 495 aaKnown RBP19.63■□□□□ 0.73
SMAD1-201ENST00000302085 FOXJ3Q9UPW0 622 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 PLA2G10O15496 165 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 HLA-DQB1P01920 261 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 CD2P06729 351 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 RFX2P48378 723 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 UBE2NLQ5JXB2 153 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.63■□□□□ 0.73
SMAD1-201ENST00000302085 CMTM4Q8IZR5 234 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 GPR137CQ8N3F9 429 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 GJC3Q8NFK1 279 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 CPT1CQ8TCG5 803 aa19.63■□□□□ 0.73
SMAD1-201ENST00000302085 ZNF407Q9C0G0 2248 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 SYNGR4O95473 234 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 ACTL6AO96019 429 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 CALCBP10092 127 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 ANOS1P23352 680 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 CTSSP25774 331 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 ZNF121P58317 390 aaPredicted RBP19.62■□□□□ 0.73
SMAD1-201ENST00000302085 GRB2P62993 217 aaKnown RBP19.62■□□□□ 0.73
SMAD1-201ENST00000302085 CCDC92Q53HC0 331 aaPredicted RBP19.62■□□□□ 0.73
SMAD1-201ENST00000302085 CCBE1Q6UXH8 406 aaPredicted RBP19.62■□□□□ 0.73
SMAD1-201ENST00000302085 FBXO17Q96EF6 278 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 WACQ9BTA9 647 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 FAM186AA6NE01 2351 aa19.62■□□□□ 0.73
SMAD1-201ENST00000302085 A0A1B0GTI1 187 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 EFSO43281 561 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 ADRB1P08588 477 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 SLC2A1P11166 492 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 FSTP19883 344 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 C3AR1Q16581 482 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 NRARPQ7Z6K4 114 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 SLC25A38Q96DW6 304 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 MRI1Q9BV20 369 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 TMEM38BQ9NVV0 291 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 ZNF319Q9P2F9 582 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 N6AMT1Q9Y5N5 214 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 CEP250Q9BV73 2442 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 ACOT7O00154 380 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 CX3CR1P49238 355 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 RSPO1Q2MKA7 263 aaPredicted RBP19.61■□□□□ 0.73
SMAD1-201ENST00000302085 FNDC9Q8TBE3 224 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 SNRNP27Q8WVK2 155 aaKnown RBP19.61■□□□□ 0.73
SMAD1-201ENST00000302085 ALKBH3Q96Q83 286 aaPredicted RBP19.61■□□□□ 0.73
SMAD1-201ENST00000302085 ZDHHC11Q9H8X9 412 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 GPR35Q9HC97 309 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 ZNF275Q9NSD4 429 aaPredicted RBP19.61■□□□□ 0.73
SMAD1-201ENST00000302085 PAQR5Q9NXK6 330 aaPredicted RBP19.61■□□□□ 0.73
SMAD1-201ENST00000302085 SLC5A6Q9Y289 635 aa19.61■□□□□ 0.73
SMAD1-201ENST00000302085 GALK2Q01415 458 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 PMP22Q01453 160 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 RIPPLY2Q5TAB7 128 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 TRIQKQ629K1 86 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 PYHIN1Q6K0P9 492 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 ZNF283Q8N7M2 679 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 OR8B12Q8NGG6 310 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 NEDD4LQ96PU5 975 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 C11orf54Q9H0W9 315 aaPredicted RBP19.6■□□□□ 0.73
SMAD1-201ENST00000302085 LDAHQ9H6V9 325 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 MOB1AQ9H8S9 216 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 CKLFQ9UBR5 152 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 STEAP1Q9UHE8 339 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 MCTS1Q9ULC4 181 aaKnown RBP19.6■□□□□ 0.73
SMAD1-201ENST00000302085 CAMK2AQ9UQM7 478 aa19.6■□□□□ 0.73
SMAD1-201ENST00000302085 NOSIPQ9Y314 301 aaKnown RBP19.6■□□□□ 0.73
SMAD1-201ENST00000302085 TRGV5A0A0B4J1U4 118 aa19.59■□□□□ 0.73
SMAD1-201ENST00000302085 TTLL8A6PVC2 850 aa19.59■□□□□ 0.73
SMAD1-201ENST00000302085 CD37P11049 281 aa19.59■□□□□ 0.73
SMAD1-201ENST00000302085 CFPP27918 469 aa19.59■□□□□ 0.73
SMAD1-201ENST00000302085 CEACAM16Q2WEN9 425 aa19.59■□□□□ 0.73
SMAD1-201ENST00000302085 C11orf91Q3C1V1 193 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms