RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ST8SIA2Q92186 375 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 SUSD2Q9UGT4 822 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 SLC5A6Q9Y289 635 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 IGHV1OR15-9A0A0B4J2B8 117 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 LILRA5A6NI73 299 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 NPIPA5E9PKD4 350 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 TRAPPC6BQ86SZ2 158 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 ZDHHC12Q96GR4 267 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 CST11Q9H112 138 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 GDF2Q9UK05 429 aaPredicted RBP21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 NPIPA1Q9UND3 350 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 FADS1O60427 444 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 SRSF10O75494 262 aaKnown RBP21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 VAMP1P23763 118 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 PPP1R1AQ13522 171 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 SLC51BQ86UW2 128 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 ST7LQ8TDW4 575 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 CCDC107Q8WV48 283 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 MRGPRFQ96AM1 343 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 ADAT3Q96EY9 351 aaPredicted RBP21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 C5orf34Q96MH7 638 aa21.78■■□□□ 1.08
SPTSSA-201ENST00000298130 DCNP07585 359 aaKnown RBP21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 FGF2P09038 288 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 H2BFMP0C1H6 154 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 CSNK1EP49674 416 aaKnown RBP21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 ZNF248Q8NDW4 579 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 OR13C9Q8NGT0 318 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 OR2I1PQ8NGU4 316 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 OR10K1Q8NGX5 313 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 C1orf198Q9H425 327 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 UPB1Q9UBR1 384 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 RPA2P15927 270 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 AKR1C4P17516 323 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 FOXK1P85037 733 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 UNC119Q13432 240 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 PAQR4Q8N4S7 273 aaPredicted RBP21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 ADAD2Q8NCV1 583 aaKnown RBP21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 OR6K3Q8NGY3 331 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 ZBTB8AQ96BR9 441 aa21.77■■□□□ 1.08
SPTSSA-201ENST00000298130 EEF1E1-BLOC1S5C9J1V9 151 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 PPP1R1CQ8WVI7 109 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 ZNF471Q9BX82 626 aaPredicted RBP21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 FTCDNL1E5RQL4 147 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 CRABP1P29762 137 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 INPP5JQ15735 1006 aaPredicted RBP21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 PTCRAQ6ISU1 281 aaPredicted RBP21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 NAXDQ8IW45 347 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 MRPS24Q96EL2 167 aaKnown RBP21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 VRK1Q99986 396 aaPredicted RBP21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 NICN1Q9BSH3 213 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 SLC17A5Q9NRA2 495 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 PRR13Q9NZ81 148 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 HSPB2A8KAH6 182 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 D6RAR5 112 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 RAB27BO00194 218 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 HPP00738 406 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 HRH1P35367 487 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 HSD11B2P80365 405 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 HSPB2Q16082 182 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 NARS2Q96I59 477 aaKnown RBP21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 SELENOIQ9C0D9 397 aa21.76■■□□□ 1.07
SPTSSA-201ENST00000298130 ATP6V1G2-DDX39BF2Z307 99 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 LDLRAD4O15165 306 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 CD96P40200 585 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 AKR1C2P52895 323 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 TLE3Q04726 772 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 AKR1C1Q04828 323 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 GFOD2Q3B7J2 385 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 RNASE10Q5GAN6 216 aaKnown RBP21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 UNQ6126/PRO20091Q6UXV3 157 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 OR5M8Q8NGP6 311 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 SLC25A21Q9BQT8 299 aaPredicted RBP21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 PMP2P02689 132 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 PNLIPRP2P54317 469 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 DEFA5Q01523 94 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 MPPED2Q15777 294 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 OVCH2Q7RTZ1 564 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 PXT1Q8NFP0 134 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 ASB10Q8WXI3 467 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 DMDP11532 3685 aa21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 PHF3Q92576 2039 aaKnown RBP21.75■■□□□ 1.07
SPTSSA-201ENST00000298130 ADAM10O14672 748 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 TPPPO94811 219 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 CFPP27918 469 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 CDAP32320 146 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 PRKXP51817 358 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 BIDP55957 195 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 C14orf28Q4W4Y0 310 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 COX15Q7KZN9 410 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 NUP54Q7Z3B4 507 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 C11orf40Q8WZ69 217 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 SEC61A2Q9H9S3 476 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 FRYLO94915 3013 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 A0A1W2PQD3 144 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 PLATP00750 562 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 IGLV3-19P01714 112 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 CALCRP30988 508 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms