RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 KCNRGQ8N5I3 272 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 OR4N2Q8NGD1 307 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 SIRT3Q9NTG7 399 aaPredicted RBP12.19□□□□□ -0.46
HPS3-201ENST00000296051 CSAG2Q9Y5P2 127 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
HPS3-201ENST00000296051 SULT1B1O43704 296 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 NSA2O95478 260 aaKnown RBP12.19□□□□□ -0.46
HPS3-201ENST00000296051 LPLP06858 475 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 RRASP10301 218 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 PCBD1P61457 104 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 PPA1Q15181 289 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 TMEM244Q5VVB8 128 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 CORO6Q6QEF8 472 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 CDH26Q8IXH8 852 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 FBLIM1Q8WUP2 373 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 UQCC2Q9BRT2 126 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 OR10A2Q9H208 303 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 NTMQ9P121 344 aa12.19□□□□□ -0.46
HPS3-201ENST00000296051 SIRT4Q9Y6E7 314 aaPredicted RBP12.19□□□□□ -0.46
HPS3-201ENST00000296051 TRPM6Q9BX84 2022 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 SLC22A23A1A5C7 686 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 ZFPL1O95159 310 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 ZGLP1P0C6A0 271 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 SLC35A1P78382 337 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 BAMBIQ13145 260 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 GPR139Q6DWJ6 353 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 OR5D14Q8NGL3 314 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 SARAFQ96BY9 339 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 TINAGL1Q9GZM7 467 aaPredicted RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 PIGMQ9H3S5 423 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 TAS2R4Q9NYW5 299 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 LOC100289279A0A1B0GTE1 492 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 K7EPK0 472 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 SDCBPO00560 298 aaPredicted RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 AKR1C8PQ5T2L2 129 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 B3GNTL1Q67FW5 361 aaPredicted RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 MUC20Q8N307 709 aaPredicted RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 FAM71E2Q8N5Q1 922 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 EIF1P41567 113 aaKnown RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 GLDNQ6ZMI3 551 aaPredicted RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 VASH2Q86V25 355 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 SLC25A21Q9BQT8 299 aaPredicted RBP12.18□□□□□ -0.46
HPS3-201ENST00000296051 PCED1AQ9H1Q7 454 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 KCNK15Q9H427 330 aa12.18□□□□□ -0.46
HPS3-201ENST00000296051 FIGNL2A6NMB9 653 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 DIRAS3O95661 229 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 BIDP55957 195 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 PPIAP62937 165 aaKnown RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 COMTD1Q86VU5 262 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 MISPQ8IVT2 679 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 SULF2Q8IWU5 870 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 PAPOLGQ9BWT3 736 aaKnown RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 TEX101Q9BY14 249 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 PLA2G3Q9NZ20 509 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 OR2J2O76002 312 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 GPANK1O95872 356 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 IFNA17P01571 189 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 EPHA8P29322 1005 aaPredicted RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 KIRREL2Q6UWL6 708 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 OR11G2Q8NGC1 345 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 OR11H4Q8NGC9 324 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 ZNF705GA8MUZ8 300 aaPredicted RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 MCRIP1C9JLW8 97 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 CISD3P0C7P0 127 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 EPHA1P21709 976 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 GPR3P46089 330 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 PMPCAQ10713 525 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 FZD2Q14332 565 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 ARHGAP11BQ3KRB8 267 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 SEZ6L2Q6UXD5 910 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 GFRALQ6UXV0 394 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 WDSUB1Q8N9V3 476 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 FAM213BQ8TBF2 198 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 RSPRY1Q96DX4 576 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 KIF25Q9UIL4 384 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 KCNG2Q9UJ96 466 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 SERPINF1P36955 418 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 EMDP50402 254 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 BDH1Q02338 343 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 RIPPLY1Q0D2K3 151 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 TCTN1Q2MV58 587 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 MKXQ8IYA7 352 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 EMC6Q9BV81 110 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 C19orf53Q9UNZ5 99 aaPredicted RBP12.17□□□□□ -0.46
HPS3-201ENST00000296051 SIGLEC7Q9Y286 467 aa12.17□□□□□ -0.46
HPS3-201ENST00000296051 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 C5orf67F2Z3F1 127 aa12.16□□□□□ -0.46
HPS3-201ENST00000296051 SULT1C2O00338 296 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms