RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 POU4F2Q12837 409 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 PCK2Q16822 640 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 OR7E24Q6IFN5 339 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 Q6ZNX1 250 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 MDP1Q86V88 176 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 OR10S1Q8NGN2 331 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 OR2AJ1Q8NGZ0 328 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 OTOSQ8NHW6 89 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
CCDC140-201ENST00000295226 ZC3HAV1LQ96H79 300 aaKnown RBP13.21□□□□□ -0.29
CCDC140-201ENST00000295226 ABHD6Q9BV23 337 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 HDHD5Q9BXW7 423 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 NXF2Q9GZY0 626 aaKnown RBP13.21□□□□□ -0.29
CCDC140-201ENST00000295226 LAMP5Q9UJQ1 280 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 HCFC1P51610 2035 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 METTL15A6NJ78 407 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 OR5H1A6NKK0 313 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 ALOX5APP20292 161 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 ETV1P50549 477 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 RAB1AP62820 205 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 PSG4Q00888 419 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF85Q03923 595 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 TSTQ16762 297 aaKnown RBP13.21□□□□□ -0.3
CCDC140-201ENST00000295226 FBXL19-AS1Q494R0 122 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 NRN1LQ496H8 165 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 CCDC92Q53HC0 331 aaPredicted RBP13.21□□□□□ -0.3
CCDC140-201ENST00000295226 TEX30Q5JUR7 227 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF774Q6NX45 483 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 C1orf162Q8NEQ5 155 aaPredicted RBP13.21□□□□□ -0.3
CCDC140-201ENST00000295226 ST7LQ8TDW4 575 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 SLC7A6Q92536 515 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 OPALINQ96PE5 141 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 OR5M11Q96RB7 305 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 CENPMQ9NSP4 180 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.3
CCDC140-201ENST00000295226 DAPL1A0PJW8 107 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 TMCC2O75069 709 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 CELA3BP08861 270 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 OR2T7P0C7T2 308 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 AGAP20933 346 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 CD40LGP29965 261 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 TAB1Q15750 504 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 RGS21Q2M5E4 152 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 SLC36A2Q495M3 483 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 PABPC1L2AQ5JQF8 200 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 ACBD7Q8N6N7 88 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 CPEB3Q8NE35 698 aaKnown RBP13.2□□□□□ -0.3
CCDC140-201ENST00000295226 STEAP2Q8NFT2 490 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 OR2T27Q8NH04 317 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 LINC01560Q8TB33 94 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 WFIKKN1Q96NZ8 548 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF649Q9BS31 505 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 OR2H1Q9GZK4 316 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
CCDC140-201ENST00000295226 TIMM10BQ9Y5J6 103 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
CCDC140-201ENST00000295226 LOC100506127A0A0U1RQW1 187 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF670-ZNF695F2Z2N8 137 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 C19orf84I3L1E1 186 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 IGHA1P01876 353 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 HOXC12P31275 282 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 S100A5P33763 92 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 GSG1Q2KHT4 349 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 LRRN1Q6UXK5 716 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 PLEKHG7Q6ZR37 379 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 MYPOPQ86VE0 399 aaPredicted RBP13.19□□□□□ -0.3
CCDC140-201ENST00000295226 GJC3Q8NFK1 279 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 CHPT1Q8WUD6 406 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 SLAMF6Q96DU3 332 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 CHCHD6Q9BRQ6 235 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 JAM3Q9BX67 310 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 OR51E2Q9H255 320 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 C1orf198Q9H425 327 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 PNRC2Q9NPJ4 139 aaKnown RBP13.19□□□□□ -0.3
CCDC140-201ENST00000295226 NDUFB11Q9NX14 153 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 ERVK13-1Q9NX77 482 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 SLCO1C1Q9NYB5 712 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 PLEK2Q9NYT0 353 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 STUB1Q9UNE7 303 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 PEX16Q9Y5Y5 336 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 TENM4Q6N022 2769 aa13.19□□□□□ -0.3
CCDC140-201ENST00000295226 WIPF3A6NGB9 483 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 SGCEO43556 437 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 THBDP07204 575 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 CCL2P13500 99 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 WNT4P56705 351 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 HIST1H3AP68431 136 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 HIST2H3PS2Q5TEC6 136 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF322Q6U7Q0 402 aaPredicted RBP13.18□□□□□ -0.3
CCDC140-201ENST00000295226 HIST2H3AQ71DI3 136 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 VASH1Q7L8A9 365 aaPredicted RBP13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF584Q8IVC4 421 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms