RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 RSPO1Q2MKA7 263 aaPredicted RBP21.24■□□□□ 0.99
U2AF1-201ENST00000291552 CORO6Q6QEF8 472 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 DEFB108BQ8NET1 73 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 PTP4A1Q93096 173 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 COG8Q96MW5 612 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 OR52D1Q9H346 318 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 C7orf69Q9H7B7 122 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 PATZ1Q9HBE1 687 aaKnown RBP21.24■□□□□ 0.99
U2AF1-201ENST00000291552 ESM1Q9NQ30 184 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 MMP26Q9NRE1 261 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 IL19Q9UHD0 177 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 B9D1Q9UPM9 204 aa21.24■□□□□ 0.99
U2AF1-201ENST00000291552 PPIAL4EA0A075B759 164 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 PPIAL4CA0A0B4J2A2 164 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 F5H0A9 414 aaPredicted RBP21.23■□□□□ 0.99
U2AF1-201ENST00000291552 PPIAL4DF5H284 164 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 J3QW42 95 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 PPIAL4FP0DN26 164 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 HSD17B1P14061 328 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 TNFRSF1AP19438 455 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 MSX2P35548 267 aaPredicted RBP21.23■□□□□ 0.99
U2AF1-201ENST00000291552 RGS6P49758 472 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 MMP16P51512 607 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 BTG1P62324 171 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 SPIBQ01892 262 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 COX10Q12887 443 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 KRTAP27-1Q3LI81 207 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 TMEM155Q4W5P6 130 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 OR2T2Q6IF00 324 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 LEG1Q6P5S2 330 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 OR6V1Q8N148 313 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 SLC26A10Q8NG04 563 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 NANPQ8TBE9 248 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 ST7LQ8TDW4 575 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 PYURFQ96I23 114 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 NMNAT3Q96T66 252 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 COQ7Q99807 217 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 HDHD2Q9H0R4 259 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 KRCC1Q9NPI7 259 aaPredicted RBP21.23■□□□□ 0.99
U2AF1-201ENST00000291552 CD300AQ9UGN4 299 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 PPP1R3CQ9UQK1 317 aa21.23■□□□□ 0.99
U2AF1-201ENST00000291552 TRAPPC2LH3BP13 241 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 GADD45GO95257 159 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 HIST1H1CP16403 213 aaKnown RBP21.22■□□□□ 0.99
U2AF1-201ENST00000291552 FPR3P25089 353 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 CFPP27918 469 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 CRABP1P29762 137 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 KRT72Q14CN4 511 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 RFX4Q33E94 735 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 C12orf54Q6X4T0 127 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 LRRC28Q86X40 367 aaPredicted RBP21.22■□□□□ 0.99
U2AF1-201ENST00000291552 SPICQ8N5J4 248 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 OR10AD1Q8NGE0 317 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 GCM1Q9NP62 436 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 MAGEL2Q9UJ55 1249 aa21.22■□□□□ 0.99
U2AF1-201ENST00000291552 POLR3KQ9Y2Y1 108 aaPredicted RBP21.22■□□□□ 0.99
U2AF1-201ENST00000291552 H0YL77 283 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 ARPC2O15144 300 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 ARPC3O15145 178 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 MLNRO43193 412 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 FOXH1O75593 365 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 SLC6A6P31641 620 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 CENPAP49450 140 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 TUSC1Q2TAM9 212 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 PGM2L1Q6PCE3 622 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 DNM1P34Q6PK57 102 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 CFAP77Q6ZQR2 320 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 LINC00346Q8IVM7 164 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 GJC3Q8NFK1 279 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 OR4K13Q8NH42 304 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 FAM216AQ8WUB2 273 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 C22orf15Q8WYQ4 148 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 DVL3Q92997 716 aaPredicted RBP21.21■□□□□ 0.99
U2AF1-201ENST00000291552 APOBEC3DQ96AK3 386 aaPredicted RBP21.21■□□□□ 0.99
U2AF1-201ENST00000291552 FN3KQ9H479 309 aa21.21■□□□□ 0.99
U2AF1-201ENST00000291552 SRA1Q9HD15 236 aaKnown RBP21.21■□□□□ 0.99
U2AF1-201ENST00000291552 TMEM178BH3BS89 294 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 GMNNO75496 209 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 SLC6A9P48067 706 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 GSSP48637 474 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 PRSS12P56730 875 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 ACTG1P63261 375 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 SLC18B1Q6NT16 456 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 COLCA1Q6ZS62 124 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 JAZF1Q86VZ6 243 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 PGAM4Q8N0Y7 254 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 ZDHHC22Q8N966 263 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 OR8G5Q8NG78 346 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 MEGF10Q96KG7 1140 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 SUCNR1Q9BXA5 334 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 RPRD1BQ9NQG5 326 aaKnown RBP21.2■□□□□ 0.98
U2AF1-201ENST00000291552 ARL8BQ9NVJ2 186 aa21.2■□□□□ 0.98
U2AF1-201ENST00000291552 TMEM89A2RUT3 159 aa21.19■□□□□ 0.98
U2AF1-201ENST00000291552 OR6C68A6NDL8 312 aa21.19■□□□□ 0.98
U2AF1-201ENST00000291552 A8MXK9 166 aa21.19■□□□□ 0.98
U2AF1-201ENST00000291552 SURF4O15260 269 aa21.19■□□□□ 0.98
U2AF1-201ENST00000291552 ZNF12P17014 697 aa21.19■□□□□ 0.98
U2AF1-201ENST00000291552 COMPP49747 757 aaPredicted RBP21.19■□□□□ 0.98
U2AF1-201ENST00000291552 SMIM11AP58511 58 aa21.19■□□□□ 0.98
U2AF1-201ENST00000291552 ZNF620Q6ZNG0 422 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms