RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SLC14A2Q15849 920 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC35D3Q5M8T2 416 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 SPANXN5Q5MJ07 72 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 PRAMEF5Q5TYX0 476 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 PRAMEF6Q5VXH4 476 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 ANKRD33Q7Z3H0 272 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 OR5K2Q8NHB8 316 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 FAM3CQ92520 227 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 TSLPQ969D9 159 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC46A1Q96NT5 459 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 KLF16Q9BXK1 252 aaPredicted RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 TMEM38AQ9H6F2 299 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 DNMT3BQ9UBC3 853 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 CHST2Q9Y4C5 530 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 COL11A1P12107 1806 aaPredicted RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 ANKUB1A6NFN9 424 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 SPP1P10451 314 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 CTSAP10619 480 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 RPL12P30050 165 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 ADRA1AP35348 466 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 PXNP49023 591 aaPredicted RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 RPL11P62913 178 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 MED25Q71SY5 747 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 GABRG1Q8N1C3 465 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 C11orf42Q8N5U0 333 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 LKAAEAR1Q8TD35 194 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 NPAS1Q99742 590 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 ATF6BQ99941 703 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC2A8Q9NY64 477 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 KIAA0100Q14667 2235 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC5A10A0PJK1 596 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 PRKRAO75569 313 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 PTBP3O95758 552 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 CD63P08962 238 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 EN2P19622 333 aaPredicted RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 COL13A1Q5TAT6 717 aaPredicted RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 OVCH2Q7RTZ1 564 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 PPP1R3BQ86XI6 285 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 ZFP62Q8NB50 900 aaPredicted RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 OR4C5Q8NGB2 326 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 RHBDD1Q8TEB9 315 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 HHIPQ96QV1 700 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 PLA2G12AQ9BZM1 189 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 ELF5Q9UKW6 265 aaPredicted RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 FAM96BQ9Y3D0 163 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 YTHDF2Q9Y5A9 579 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 CITO14578 2027 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 TCAPO15273 167 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 UTS2O95399 124 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 NQO2P16083 231 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 DTYMKP23919 212 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 CSNK1DP48730 415 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 RAC1P63000 192 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 OR10J5Q8NHC4 309 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 ARSGQ96EG1 525 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 WDFY2Q96P53 400 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 MOB1AQ9H8S9 216 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 LAMP3Q9UQV4 416 aa9.82□□□□□ -0.84
PKNOX1-201ENST00000291547 G3V3Y1 287 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 C1SP09871 688 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SNRPNP63162 240 aaKnown RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 RPL7L1Q6DKI1 246 aaKnown RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 H1FXQ92522 213 aaKnown RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF2Q9BSG1 426 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 MS4A8Q9BY19 250 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SRRQ9GZT4 340 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ZDHHC11Q9H8X9 412 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 DUSP22Q9NRW4 184 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 LRIT1Q9P2V4 623 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF814B7Z6K7 855 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 AQP8O94778 261 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 DMWDQ09019 674 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 C17orf67Q0P5P2 114 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 MISPQ8IVT2 679 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC16A11Q8NCK7 471 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 OR10G3Q8NGC4 313 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF596Q8TC21 504 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC35E1Q96K37 410 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 MBOAT4Q96T53 435 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 HCFC1R1Q9NWW0 138 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 FLVCR2Q9UPI3 526 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SLCO1B1Q9Y6L6 691 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SBF1O95248 1867 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 KIAA1217Q5T5P2 1943 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 GPR31O00270 319 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 CSN1S1P47710 185 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 HES1Q14469 280 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 LPAL2Q16609 132 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ADIPOR2Q86V24 386 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 RBM45Q8IUH3 476 aaKnown RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 BATF2Q8N1L9 274 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 STPG2Q8N412 459 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 GJC3Q8NFK1 279 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 TM4SF18Q96CE8 201 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 LCORQ96JN0 433 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 TEX37Q96LM6 180 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC22A12Q96S37 553 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SOX7Q9BT81 388 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms