RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NPIPA2E9PIF3 369 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 NPIPA3F8WFD2 350 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 SLC17A2O00624 439 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 STK17BO94768 372 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 SLC26A5P58743 744 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 FXYD4P59646 89 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 EGR3Q06889 387 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 C17orf67Q0P5P2 114 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 TDGQ13569 410 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMAD6-201ENST00000288840 GLIPR1L1Q6UWM5 242 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 ZBTB44Q8NCP5 570 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 OR6M1Q8NGM8 313 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 ST8SIA4Q92187 359 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 PIGTQ969N2 578 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 PHB2Q99623 299 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 PTTG3PQ9NZH4 202 aa14.28□□□□□ -0.12
SMAD6-201ENST00000288840 SPEGQ15772 3267 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 LMO7DNF2Z398 122 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 FADS1O60427 444 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 IGF2P01344 180 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 HRH1P35367 487 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 SLC25A1P53007 311 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 DCAF7P61962 342 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 INSM1Q01101 510 aaPredicted RBP14.27□□□□□ -0.12
SMAD6-201ENST00000288840 CAMK2BQ13554 666 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 THRSPQ92748 146 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 SORCS2Q96PQ0 1159 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 ZNF160Q9HCG1 818 aa14.27□□□□□ -0.12
SMAD6-201ENST00000288840 CXCL2P19875 107 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 ADGRG3Q86Y34 549 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 OR4K15Q8NH41 348 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 PARP12Q9H0J9 701 aaKnown RBP14.27□□□□□ -0.13
SMAD6-201ENST00000288840 FAM230AA0A1W2PPH8 454 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 FARS2O95363 451 aaKnown RBP14.27□□□□□ -0.13
SMAD6-201ENST00000288840 KLK3P07288 261 aaPredicted RBP14.27□□□□□ -0.13
SMAD6-201ENST00000288840 POU2F2P09086 479 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 SLC43A2Q8N370 569 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 OR52N4Q8NGI2 321 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 SLC5A6Q9Y289 635 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.13
SMAD6-201ENST00000288840 KIAA1671Q9BY89 1806 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 hCG_1807616A0A1W2PRN6 198 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 A6NIZ1 184 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 LPLP06858 475 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 FAM157BP0CG42 384 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 RAP1BP61224 184 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 RAP1AP62834 184 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 RSPO4Q2I0M5 234 aaPredicted RBP14.26□□□□□ -0.13
SMAD6-201ENST00000288840 CHRFAM7AQ494W8 412 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 ANKRD16Q6P6B7 361 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 EID2Q8N6I1 236 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 OR5T2Q8NGG2 359 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 OR1N1Q8NGS0 311 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 C11orf40Q8WZ69 217 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 CST11Q9H112 138 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 SLC22A11Q9NSA0 550 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 DKKL1Q9UK85 242 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 NUP50Q9UKX7 468 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 IGHV1OR21-1A0A087WYE8 117 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 OR5H14A6NHG9 310 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 MCRIP1C9JLW8 97 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 RIN1Q13671 783 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 OR5H2Q8NGV7 314 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 MARCH1Q8TCQ1 289 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 LRFN5Q96NI6 719 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 DNAJC13O75165 2243 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 RER1O15258 196 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 EIF4E2O60573 245 aaKnown RBP14.26□□□□□ -0.13
SMAD6-201ENST00000288840 ZNF254O75437 659 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 TGM6O95932 706 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 IGHV3-9P01782 118 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 ASAH2BP0C7U1 165 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 MAP2K6P52564 334 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 HLXQ14774 488 aaPredicted RBP14.26□□□□□ -0.13
SMAD6-201ENST00000288840 C2orf68Q2NKX9 166 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 MOGAT2Q3SYC2 334 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 EMC4Q5J8M3 183 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 GTPBP8Q8N3Z3 284 aaPredicted RBP14.26□□□□□ -0.13
SMAD6-201ENST00000288840 OR5L2Q8NGL0 311 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 ELP5Q8TE02 316 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 GFI1Q99684 422 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 S1PR5Q9H228 398 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 EVA1AQ9H8M9 152 aa14.26□□□□□ -0.13
SMAD6-201ENST00000288840 MRPS28Q9Y2Q9 187 aaKnown RBP14.26□□□□□ -0.13
SMAD6-201ENST00000288840 PTRH2Q9Y3E5 179 aaKnown RBP14.26□□□□□ -0.13
SMAD6-201ENST00000288840 FBXO24O75426 580 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 MT-ATP6P00846 226 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 FOXK1P85037 733 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 OR10G3Q8NGC4 313 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 MRPS18BQ9Y676 258 aaKnown RBP14.25□□□□□ -0.13
SMAD6-201ENST00000288840 WISP1O95388 367 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 WNT11O96014 354 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 ERCC1P07992 297 aaPredicted RBP14.25□□□□□ -0.13
SMAD6-201ENST00000288840 RAB3CQ96E17 227 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 LINC00052Q96N35 136 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 NPAS1Q99742 590 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 GPR84Q9NQS5 396 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 ALKBH4Q9NXW9 302 aa14.25□□□□□ -0.13
SMAD6-201ENST00000288840 DOCK7Q96N67 2140 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms