RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 Q8N402 240 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 OR10G8Q8NGN5 311 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PYDC1Q8WXC3 89 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ARPC1AQ92747 370 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SCGB3A2Q96PL1 93 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SLC38A1Q9H2H9 487 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 IKZF5Q9H5V7 419 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 NECAP2Q9NVZ3 263 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PPP2R2CQ9Y2T4 447 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ZNF337Q9Y3M9 751 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 KCNE1BA0A087WTH5 132 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 TMEM213A2RRL7 107 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 TVP23AA6NH52 213 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 SLCO1B7G3V0H7 640 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 UBDO15205 165 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 XPNPEP2O43895 674 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 GATBO75879 557 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 KLF8O95600 359 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 CFHR2P36980 270 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 PTH2RP49190 550 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 MRPS11P82912 194 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 VLDLRP98155 873 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 C2orf80Q0P641 193 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ZNHIT3Q15649 155 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 PAQR6Q6TCH4 344 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 UGT2A3Q6UWM9 527 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 SMIM15Q7Z3B0 74 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 SLC13A5Q86YT5 568 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 LACC1Q8IV20 430 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 PELI3Q8N2H9 469 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ITFG1Q8TB96 612 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 WFIKKN1Q96NZ8 548 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 MS4A4EQ96PG1 132 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ZNF184Q99676 751 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 FAM173AQ9BQD7 235 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 RNF167Q9H6Y7 350 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 C19orf12Q9NSK7 152 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 GID8Q9NWU2 228 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 WIF1Q9Y5W5 379 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ASPDHA6ND91 283 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 A6NIZ1 184 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 HHLA1C9JL84 531 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ANKRD63C9JTQ0 380 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 H0YJX3 145 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 SULT2B1O00204 365 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 CCL21O00585 134 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ITGB1BP1O14713 200 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 RBBP9O75884 186 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 TAL1P17542 331 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 ZFP36P26651 326 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 HLA-DMAP28067 261 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 GRPRP30550 384 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 OR3A4PP47883 348 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 RAP1BP61224 184 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 C1orf61Q13536 156 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 TAB1Q15750 504 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 EXOC3L4Q17RC7 722 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ZNF672Q499Z4 452 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 COQ5Q5HYK3 327 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 C10orf25Q5T742 122 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 APOBEC3HQ6NTF7 200 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 OR2D3Q8NGH3 330 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 TFB1MQ8WVM0 346 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 C20orf173Q96LM9 149 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 MCRIP2Q9BUT9 160 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 PLEKHJ1Q9NW61 149 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 DNAJC27Q9NZQ0 273 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 FOXJ2Q9P0K8 574 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 NXT1Q9UKK6 140 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 SCML2Q9UQR0 700 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 DOCK1Q14185 1865 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 CCDC166P0CW27 439 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 SMIM10L1P0DMW3 83 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 THRAP10827 490 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 OR1E1P30953 314 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 OR2B6P58173 313 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 POLR2GP62487 172 aaKnown RBP eCLIP2.34□□□□□ -2.03
CHD1-201ENST00000284049 SP4Q02446 784 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 DPYSL3Q14195 570 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 SLC1A5Q15758 541 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 MOGQ16653 247 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 EMBQ6PCB8 327 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 RBMS3Q6XE24 437 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 HDDC2Q7Z4H3 204 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 TRPT1Q86TN4 253 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 PRSS58Q8IYP2 241 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 PRELID2Q8N945 189 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ZNRF4Q8WWF5 429 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 CNRIP1Q96F85 164 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 SMIM10Q96HG1 83 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ADTRPQ96IZ2 230 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 MAGEB18Q96M61 343 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 ALKBH3Q96Q83 286 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 METTL9Q9H1A3 318 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 TMEM38AQ9H6F2 299 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 RPF2Q9H7B2 306 aaKnown RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 SLC25A22Q9H936 323 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 MYOZ1Q9NP98 299 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 MEPEQ9NQ76 525 aaPredicted RBP2.34□□□□□ -2.03
CHD1-201ENST00000284049 RARRES3Q9UL19 164 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms