RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 PNPLA2Q96AD5 504 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 ORAI1Q96D31 301 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 ACTR6Q9GZN1 396 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 DIABLOQ9NR28 239 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 CENPMQ9NSP4 180 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 SLC22A13Q9Y226 551 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 AHCTF1Q8WYP5 2266 aa13.59□□□□□ -0.23
SF3B4-201ENST00000271628 TRAV6A0A075B6T7 132 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 CDRT15L2A8MXV6 281 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 TNFRSF10AO00220 468 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 FABP7O15540 132 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 CD2P06729 351 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 SNRPBP14678 240 aaKnown RBP13.58□□□□□ -0.24
SF3B4-201ENST00000271628 KLK2P20151 261 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 CSNK1A1P48729 337 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 OTOGLQ3ZCN5 2332 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 TMEM244Q5VVB8 128 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 OR2M7Q8NG81 312 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 OR51A4Q8NGJ6 313 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 OR6N1Q8NGY5 312 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 PHF21AQ96BD5 680 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 SIGLEC12Q96PQ1 595 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 CACNG6Q9BXT2 260 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 OR52A1Q9UKL2 312 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 DHDHQ9UQ10 334 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 POLR1DQ9Y2S0 133 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 EMC9Q9Y3B6 208 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 CACNA1CQ13936 2221 aa13.58□□□□□ -0.24
SF3B4-201ENST00000271628 IGHV3-15A0A0B4J1V0 119 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 ANXA2P2A6NMY6 339 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 AKR7A2O43488 359 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 F10P00742 488 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 ANXA2P07355 339 aaKnown RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 CD3GP09693 182 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 CALCBP10092 127 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF133P52736 654 aaPredicted RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 MFGE8Q08431 387 aaPredicted RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 MFAP5Q13361 173 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 OR1C1Q15619 314 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 WIPI1Q5MNZ9 446 aaPredicted RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 PDSS1Q5T2R2 415 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 CORO6Q6QEF8 472 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 GGNQ86UU5 652 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 SIAH3Q8IW03 269 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 OR10AC1Q8NH08 325 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 TMEM54Q969K7 222 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 ZFP3Q96NJ6 502 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 UCN2Q96RP3 112 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 GFI1Q99684 422 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 OR51J1Q9H342 316 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 HHLA2Q9UM44 414 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF878C9JN71 531 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 SMLR1H3BR10 107 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 WNT11O96014 354 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 UBCP0CG48 685 aaKnown RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 ANXA3P12429 323 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 GIFP27352 417 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 GFRA1P56159 465 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 SCAND1P57086 179 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 LSM6P62312 80 aaKnown RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 SNTB2Q13425 540 aaKnown RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 UBE2NLQ5JXB2 153 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 C10orf128Q5T292 105 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 LRRTM1Q86UE6 522 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 SMIM4Q8WVI0 70 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 ZNF385AQ96PM9 386 aaKnown RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 SRXN1Q9BYN0 137 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 G6PC2Q9NQR9 355 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 CKLFQ9UBR5 152 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 GDF2Q9UK05 429 aaPredicted RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 FBXL3Q9UKT7 428 aa13.57□□□□□ -0.24
SF3B4-201ENST00000271628 MRPS7Q9Y2R9 242 aaKnown RBP13.57□□□□□ -0.24
SF3B4-201ENST00000271628 PINLYPA6NC86 204 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 ERVH48-1M5A8F1 160 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 SMAD9O15198 467 aaKnown RBP13.56□□□□□ -0.24
SF3B4-201ENST00000271628 WDPCPO95876 746 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 POU3F2P20265 443 aaPredicted RBP13.56□□□□□ -0.24
SF3B4-201ENST00000271628 ACHEP22303 614 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 SUCLG1P53597 346 aaKnown RBP13.56□□□□□ -0.24
SF3B4-201ENST00000271628 RRADP55042 308 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 SNRPD2P62316 118 aaKnown RBP13.56□□□□□ -0.24
SF3B4-201ENST00000271628 DGCR2P98153 550 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 HES5Q5TA89 166 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 LINC00696Q6ZRV3 163 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 BTN2A1Q7KYR7 527 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 GALNT16Q8N428 558 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 OR11H7Q8NGC8 314 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 OR2V1Q8NHB1 315 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 ASB5Q8WWX0 329 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 CPNE4Q96A23 557 aaPredicted RBP13.56□□□□□ -0.24
SF3B4-201ENST00000271628 ADGRG7Q96K78 797 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 LIN7BQ9HAP6 207 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 FOXJ3Q9UPW0 622 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 LHFPL6Q9Y693 200 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 KIAA1549Q9HCM3 1950 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 MED12Q93074 2177 aa13.56□□□□□ -0.24
SF3B4-201ENST00000271628 H0YC42 278 aa13.55□□□□□ -0.24
SF3B4-201ENST00000271628 MAS1P04201 325 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms