RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 MC2RQ01718 297 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 NR0B2Q15466 257 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 ISXQ2M1V0 245 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 NUP54Q7Z3B4 507 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 BVESQ8NE79 360 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 WNT2BQ93097 391 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 GPER1Q99527 375 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 ZNF275Q9NSD4 429 aaPredicted RBP11.36□□□□□ -0.59
LIG1-201ENST00000263274 SLC39A1Q9NY26 324 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 GLS2Q9UI32 602 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 OR52A1Q9UKL2 312 aa11.36□□□□□ -0.59
LIG1-201ENST00000263274 OR14I1A6ND48 311 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 FAM74A7A6NL05 159 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 HMSDA8MTL9 139 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 PMP2P02689 132 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 DRD1P21728 446 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 FAM74A3Q4VXF1 159 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 ATPAF1Q5TC12 328 aaPredicted RBP11.35□□□□□ -0.59
LIG1-201ENST00000263274 PAPD4Q6PIY7 484 aaKnown RBP11.35□□□□□ -0.59
LIG1-201ENST00000263274 KLHL24Q6TFL4 600 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 OR5M9Q8NGP3 310 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 RNF128Q8TEB7 428 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 MCHR2Q969V1 340 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 LRRC46Q96FV0 321 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 ELL3Q9HB65 397 aaPredicted RBP11.35□□□□□ -0.59
LIG1-201ENST00000263274 CLDN16Q9Y5I7 305 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 CSF2RBP32927 897 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 CCINQ13939 588 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 TMEM88Q6PEY1 159 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 FJX1Q86VR8 437 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 GPX8Q8TED1 209 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 NPRL2Q8WTW4 380 aa11.35□□□□□ -0.59
LIG1-201ENST00000263274 GPN3Q9UHW5 284 aaPredicted RBP11.35□□□□□ -0.59
LIG1-201ENST00000263274 MUC22E2RYF6 1773 aaPredicted RBP11.35□□□□□ -0.59
LIG1-201ENST00000263274 RFPL4AA6NLU0 287 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 RFPL4AL1F8VTS6 287 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 GNB3P16520 340 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 EPHA4P54764 986 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 EMC4Q5J8M3 183 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 KIAA0895LQ68EN5 471 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 LANCL3Q6ZV70 420 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 Q7L0L9 218 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 OR4D6Q8NGJ1 314 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 ARL5BQ96KC2 179 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 LAT2Q9GZY6 243 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 PRR13Q9NZ81 148 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 CFAP54Q96N23 3096 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 SYT7O43581 403 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 AGTR1P30556 359 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 CAPZBP47756 277 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 SLC6A8P48029 635 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 TFAP2EQ6VUC0 442 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 ADGRE4PQ86SQ3 457 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 SLC25A28Q96A46 364 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 TSNAXQ99598 290 aaKnown RBP11.34□□□□□ -0.59
LIG1-201ENST00000263274 PELOQ9BRX2 385 aaKnown RBP11.34□□□□□ -0.59
LIG1-201ENST00000263274 FADS1O60427 444 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 MPIG6BO95866 241 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 WDPCPO95876 746 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 BGLAPP02818 100 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 GIMD1P0DJR0 217 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 MRPS21P82921 87 aaKnown RBP11.34□□□□□ -0.59
LIG1-201ENST00000263274 TLE3Q04726 772 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 PPP1R1AQ13522 171 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 SWI5Q1ZZU3 235 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 AWAT2Q6E213 333 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 PAQR8Q8TEZ7 354 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 C2CD4CQ8TF44 421 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 ASB17Q8WXJ9 295 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 GSKIPQ9P0R6 139 aa11.34□□□□□ -0.59
LIG1-201ENST00000263274 PHF3Q92576 2039 aaKnown RBP11.34□□□□□ -0.59
LIG1-201ENST00000263274 ATG12O94817 140 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 APOC1P02654 83 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 HRH1P35367 487 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 ELOCQ15369 112 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 SLC9A3R2Q15599 337 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 OR52N5Q8NH56 324 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 DAZLQ92904 295 aaKnown RBP11.33□□□□□ -0.6
LIG1-201ENST00000263274 CPNE2Q96FN4 548 aaPredicted RBP11.33□□□□□ -0.6
LIG1-201ENST00000263274 FAM71F1Q96KD3 344 aaPredicted RBP11.33□□□□□ -0.6
LIG1-201ENST00000263274 MESP1Q9BRJ9 268 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 CST11Q9H112 138 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 WDR13Q9H1Z4 485 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 TXNIPQ9H3M7 391 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 BANF2Q9H503 90 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 LINC00587B1AMM8 73 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 SSX5O60225 188 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 STK17BO94768 372 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 ERCC1P07992 297 aaPredicted RBP11.33□□□□□ -0.6
LIG1-201ENST00000263274 ABCD3P28288 659 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 OR1D5P58170 312 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 ARFRP1Q13795 201 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 SGCBQ16585 318 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 OR5D18Q8NGL1 313 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 NANPQ8TBE9 248 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 SLC25A21Q9BQT8 299 aaPredicted RBP11.33□□□□□ -0.6
LIG1-201ENST00000263274 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
LIG1-201ENST00000263274 PTGES2Q9H7Z7 377 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms