RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF587BE7ETH6 402 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 AQP8O94778 261 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 TGM1P22735 817 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 C17orf67Q0P5P2 114 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 H2BFWTQ7Z2G1 175 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 ASPDHA6ND91 283 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 RFPL4AA6NLU0 287 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 RFPL4AL1F8VTS6 287 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 FXYD1O00168 92 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 THBS3P49746 956 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 DOC2BQ14184 412 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 OR51F2Q8NH61 342 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 RDH5Q92781 318 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 SRPK3Q9UPE1 567 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 ZNF749O43361 778 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 F11P03951 625 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 WNT1P04628 370 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 DCAF7P61962 342 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 VAMP3Q15836 100 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 RSPO2Q6UXX9 243 aaPredicted RBP10.98□□□□□ -0.65
SMG6-201ENST00000263073 NHLRC1Q6VVB1 395 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 OR13H1Q8NG92 308 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 SLCO1C1Q9NYB5 712 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 KCNE3Q9Y6H6 103 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 URB1O60287 2271 aaKnown RBP10.98□□□□□ -0.65
SMG6-201ENST00000263073 MEX3AA1L020 520 aaKnown RBP10.98□□□□□ -0.65
SMG6-201ENST00000263073 A8MVM7 634 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 WDR1O75083 606 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 SSR4P51571 173 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 CATSPERDQ86XM0 798 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 CLRN3Q8NCR9 226 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 UBL7Q96S82 380 aaPredicted RBP10.98□□□□□ -0.65
SMG6-201ENST00000263073 TBC1D29Q9UFV1 150 aa10.98□□□□□ -0.65
SMG6-201ENST00000263073 A0A096LPE4 126 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 A0A1W2PPZ6 126 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 POM121BA6NF01 834 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 HOXC13P31276 330 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 RPL18Q07020 188 aaKnown RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 ST3GAL2Q16842 350 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 LPCAT3Q6P1A2 487 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SKA3Q8IX90 412 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 C17orf78Q8N4C9 275 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 PIGQQ9BRB3 760 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SLIRPQ9GZT3 109 aaKnown RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 ZNF331Q9NQX6 463 aaPredicted RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 ASIC5Q9NY37 505 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 CLEC3BP05452 202 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 GLAP06280 429 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 MYOGP15173 224 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 BMP5P22003 454 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 MLF2Q15773 248 aaPredicted RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 YRDCQ86U90 279 aaKnown RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 CCL4L1Q8NHW4 92 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 CABLES2Q9BTV7 478 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 ZDHHC5Q9C0B5 715 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 RHOFQ9HBH0 211 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 GPR84Q9NQS5 396 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 CHD4Q14839 1912 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 ICOSLGO75144 302 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 PTBP1P26599 531 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■■■□ 21
SMG6-201ENST00000263073 LDLRAD1Q5T700 205 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 ZNF787Q6DD87 383 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 H1FNTQ75WM6 255 aaPredicted RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 SLC16A13Q7RTY0 426 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SPRY1O43609 319 aaPredicted RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 ONECUT2O95948 504 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SDHAP31040 664 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 HSF1Q00613 529 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 GPNMBQ14956 572 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 USP51Q70EK9 711 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 GOT1L1Q8NHS2 421 aaPredicted RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 KIRREL1Q96J84 757 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 IGLV3-10A0A075B6K4 115 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SPINK4O60575 86 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 DEFA4P12838 97 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 ZNF133P52736 654 aaPredicted RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 SRPXP78539 464 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 VWA2Q5GFL6 755 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 FAHD1Q6P587 224 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SMIM15Q7Z3B0 74 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 PRSS42Q7Z5A4 293 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 OR8D4Q8NGM9 314 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 TMPRSS13Q9BYE2 586 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 RCL1Q9Y2P8 373 aaKnown RBP10.97□□□□□ -0.65
SMG6-201ENST00000263073 FAM96BQ9Y3D0 163 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 SLCO1B1Q9Y6L6 691 aa10.97□□□□□ -0.65
SMG6-201ENST00000263073 NID1P14543 1247 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 UBALD1Q8TB05 177 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 PINX1Q96BK5 328 aaKnown RBP10.96□□□□□ -0.65
SMG6-201ENST00000263073 SMIM19Q96E16 107 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 OR2A14Q96R47 310 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 ISYNA1Q9NPH2 558 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 FAM166BA8MTA8 275 aa10.96□□□□□ -0.65
SMG6-201ENST00000263073 TGOLN2O43493 480 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms