RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 FAM169BQ8N8A8 192 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 OR1F12Q8NHA8 337 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 SNX33Q8WV41 574 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF696Q9H7X3 374 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 NDRG3Q9UGV2 375 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 IKZF2Q9UKS7 526 aa13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 HELZ2Q9BYK8 2649 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 ANKHD1Q8IWZ3 2542 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-201ENST00000260054 LOC100509620A0A075B734 347 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 IGHV1-18A0A0C4DH31 117 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 DBHP09172 617 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 CCL2P13500 99 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 IGFBP2P18065 325 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 CRYGSP22914 178 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 HTR5AP47898 357 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 OR12D2P58182 307 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 IRF3Q14653 427 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 TP53I3Q53FA7 332 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 C4orf36Q96KX1 117 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 COQ7Q99807 217 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 MROQ9BYG7 248 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 ISG20L2Q9H9L3 353 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 ELOVL3Q9HB03 270 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 FBXL3Q9UKT7 428 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 LRP12Q9Y561 859 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 TENM4Q6N022 2769 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 IQCMA0A1B0GVH7 501 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 ABHD16AO95870 558 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 H2BFMP0C1H6 154 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 CECR9P0C854 216 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 COX5BP10606 129 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 STOMP27105 288 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 ACTA2P62736 377 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 ACTG2P63267 376 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 GALK2Q01415 458 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 DYNC1I2Q13409 638 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 RNLSQ5VYX0 342 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 DEGS2Q6QHC5 323 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 PLEKHG7Q6ZR37 379 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 SSX8Q7RTT4 187 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 POM121L2Q96KW2 1035 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 MOV10Q9HCE1 1003 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 CHCHD3Q9NX63 227 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 ETAA1Q9NY74 926 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 ATPIF1Q9UII2 106 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 GNG8Q9UK08 70 aa13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 KLF2Q9Y5W3 355 aaPredicted RBP13.72□□□□□ -0.21
CCDC90B-201ENST00000260054 TMEM129A0AVI4 362 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 METTL15A6NJ78 407 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 F5H5K5 113 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 M0R1B8 84 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 MRPS14O60783 128 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 SULT1C4O75897 302 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 KRT8P05787 483 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 OTX1P32242 354 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 MAP2K4P45985 399 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 HGFACQ04756 655 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 ECH1Q13011 328 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 DOC2BQ14184 412 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 TAF13Q15543 124 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 KRTAP27-1Q3LI81 207 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF773Q6PK81 442 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 SPARTQ8N0X7 666 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 SYS1Q8N2H4 156 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 KLHL36Q8N4N3 616 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 NANOGP1Q8N7R0 232 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 ZNF485Q8NCK3 441 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 SLC30A7Q8NEW0 376 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 ACOXLQ9NUZ1 547 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 ERGIC3Q9Y282 383 aa13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 CAB39Q9Y376 341 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-201ENST00000260054 C5orf49A4QMS7 147 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 J3QLW9 94 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 MYL12BO14950 172 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF254O75437 659 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 PTHP01270 115 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF19P17023 458 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 CCNOP22674 350 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 APLNRP35414 380 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 PRKXP51817 358 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 GRB2P62993 217 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 C3orf36Q3SXR2 165 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 LIPNQ5VXI9 398 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 PAQR4Q8N4S7 273 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 YIPF7Q8N8F6 280 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 TSPAN14Q8NG11 270 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 OR52N1Q8NH53 320 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 SPRYD4Q8WW59 207 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 DACH2Q96NX9 599 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 KCNJ15Q99712 375 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 CRIM1Q9NZV1 1036 aa13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 SPTAN1Q13813 2472 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-201ENST00000260054 CLDN1O95832 211 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 ANOS1P23352 680 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 HSD11B1P28845 292 aa13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 GDI2P50395 445 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 RIDAP52758 137 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-201ENST00000260054 EMX1Q04741 257 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms