RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 NDUFAF4Q9P032 175 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 ABCD2Q9UBJ2 740 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 ATPIF1Q9UII2 106 aa17.76■□□□□ 0.43
NEDD8-201ENST00000250495 SAMD4AQ9UPU9 718 aaKnown RBP17.76■□□□□ 0.43
NEDD8-201ENST00000250495 POLR3KQ9Y2Y1 108 aaPredicted RBP17.76■□□□□ 0.43
NEDD8-201ENST00000250495 SOCS2O14508 198 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 FSHBP01225 129 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 SLC6A9P48067 706 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 BTG1P62324 171 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 KRT72Q14CN4 511 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 KCNMB1Q16558 191 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 PGM2L1Q6PCE3 622 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 DNM1P34Q6PK57 102 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 ATG16L2Q8NAA4 619 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 GJC3Q8NFK1 279 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 POP5Q969H6 163 aaKnown RBP17.75■□□□□ 0.43
NEDD8-201ENST00000250495 IL20RAQ9UHF4 553 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 POLR1DQ9Y2S0 133 aa17.75■□□□□ 0.43
NEDD8-201ENST00000250495 UNC119BA6NIH7 251 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 IFNL4K9M1U5 179 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 RER1O15258 196 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 DNAJC8O75937 253 aaPredicted RBP17.74■□□□□ 0.43
NEDD8-201ENST00000250495 TXNDC12O95881 172 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 CRABP1P29762 137 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 OTPQ5XKR4 325 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 PTCHD4Q6ZW05 846 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 OR13G1Q8NGZ3 307 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 APOBEC3DQ96AK3 386 aaPredicted RBP17.74■□□□□ 0.43
NEDD8-201ENST00000250495 ZMYND19Q96E35 227 aaPredicted RBP17.74■□□□□ 0.43
NEDD8-201ENST00000250495 C7orf34Q96L11 122 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 OR2V2Q96R30 315 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 PLA2G12AQ9BZM1 189 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 MMP26Q9NRE1 261 aa17.74■□□□□ 0.43
NEDD8-201ENST00000250495 DDX28Q9NUL7 540 aaKnown RBP17.74■□□□□ 0.43
NEDD8-201ENST00000250495 DCAF13Q9NV06 445 aaKnown RBP17.74■□□□□ 0.43
NEDD8-201ENST00000250495 TRBV4-1A0A0J9YWV2 114 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 IMPA2O14732 288 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 MDH2P40926 338 aaKnown RBP17.73■□□□□ 0.43
NEDD8-201ENST00000250495 CDKN2AP42771 156 aaKnown RBP17.73■□□□□ 0.43
NEDD8-201ENST00000250495 CENPAP49450 140 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 ZMYND11Q15326 602 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 SMARCD3Q6STE5 483 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 FBXW12Q6X9E4 464 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 RBMS3Q6XE24 437 aaKnown RBP17.73■□□□□ 0.43
NEDD8-201ENST00000250495 MUC20Q8N307 709 aaPredicted RBP17.73■□□□□ 0.43
NEDD8-201ENST00000250495 ZDHHC22Q8N966 263 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 DEFB108BQ8NET1 73 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 OR8G5Q8NG78 346 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 OR52J3Q8NH60 311 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 DVL3Q92997 716 aaPredicted RBP17.73■□□□□ 0.43
NEDD8-201ENST00000250495 ZNF582Q96NG8 517 aaPredicted RBP17.73■□□□□ 0.43
NEDD8-201ENST00000250495 SIGLEC11Q96RL6 698 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 GCM1Q9NP62 436 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 SPAG4Q9NPE6 437 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 PTTG3PQ9NZH4 202 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 AUP1Q9Y679 476 aa17.73■□□□□ 0.43
NEDD8-201ENST00000250495 TRAPPC2LH3BP13 241 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 TMEM178BH3BS89 294 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 ATP5HO75947 161 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 DBHP09172 617 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 CPT2P23786 658 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 ERFP50548 548 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 SMIM11AP58511 58 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 FXYD6P3P58550 94 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 HIST1H3AP68431 136 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 BNIP1Q12981 228 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 ZNF154Q13106 437 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 HNRNPA0Q13151 305 aaKnown RBP17.72■□□□□ 0.43
NEDD8-201ENST00000250495 SEC23BQ15437 767 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 HIST2H3PS2Q5TEC6 136 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 OR2T2Q6IF00 324 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 HIST2H3AQ71DI3 136 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 OR5AS1Q8N127 324 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 FITM2Q8N6M3 262 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 C22orf15Q8WYQ4 148 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 ERMAPQ96PL5 475 aaPredicted RBP17.72■□□□□ 0.43
NEDD8-201ENST00000250495 GPA33Q99795 319 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 COQ7Q99807 217 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 HDHD2Q9H0R4 259 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 ADA2Q9NZK5 511 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 NUP50Q9UKX7 468 aa17.72■□□□□ 0.43
NEDD8-201ENST00000250495 A8MXK9 166 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 ANKRD65E5RJM6 399 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 DIRAS1O95057 198 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 ZNF12P17014 697 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 SRP9P49458 86 aaKnown RBP17.71■□□□□ 0.43
NEDD8-201ENST00000250495 HLXQ14774 488 aaPredicted RBP17.71■□□□□ 0.43
NEDD8-201ENST00000250495 RFX4Q33E94 735 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 ESCO2Q56NI9 601 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 ARMCX4Q5H9R4 360 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 DHRS1Q96LJ7 313 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 TSSK2Q96PF2 358 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 MRI1Q9BV20 369 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 GORASP2Q9H8Y8 452 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 SRA1Q9HD15 236 aaKnown RBP17.71■□□□□ 0.43
NEDD8-201ENST00000250495 ESM1Q9NQ30 184 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 B9D1Q9UPM9 204 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 INSIG2Q9Y5U4 225 aa17.71■□□□□ 0.43
NEDD8-201ENST00000250495 F5H0A9 414 aaPredicted RBP17.7■□□□□ 0.42
NEDD8-201ENST00000250495 RENP00797 406 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms