RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SYT4Q9H2B2 425 aa15.21■□□□□ 0.03
FOXA1-201ENST00000250448 IFT22Q9H7X7 185 aa15.21■□□□□ 0.03
FOXA1-201ENST00000250448 ZNF230Q9UIE0 474 aaPredicted RBP15.21■□□□□ 0.03
FOXA1-201ENST00000250448 SIGLEC5O15389 551 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 NDUFA2O43678 99 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 EGR4Q05215 589 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF169Q14929 603 aaPredicted RBP15.21■□□□□ 0.02
FOXA1-201ENST00000250448 FAM166AQ6J272 317 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 TMEM229BQ8NBD8 167 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 LRRC46Q96FV0 321 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 NKX3-1Q99801 234 aaPredicted RBP15.21■□□□□ 0.02
FOXA1-201ENST00000250448 SRPK3Q9UPE1 567 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 MMACHCQ9Y4U1 282 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF318Q5VUA4 2279 aa15.21■□□□□ 0.02
FOXA1-201ENST00000250448 NTN3O00634 580 aaPredicted RBP15.2■□□□□ 0.02
FOXA1-201ENST00000250448 DDAH2O95865 285 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 CD8AP01732 235 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 DUSP3P51452 185 aaPredicted RBP15.2■□□□□ 0.02
FOXA1-201ENST00000250448 SLC37A1P57057 533 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 FNDC7Q5VTL7 733 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 FDX2Q6P4F2 183 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 GALNT16Q8N428 558 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 NUDT9Q9BW91 350 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF416Q9BWM5 594 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 SLC6A15Q9H2J7 730 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 ELOVL3Q9HB03 270 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 KNTC1P50748 2209 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 TTLL8A6PVC2 850 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 M0QYG6 137 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 SULT1C2O00338 296 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 PLATP00750 562 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 SKP2Q13309 424 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 ASPHD2Q6ICH7 369 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 TMEM205Q6UW68 189 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 KCNRGQ8N5I3 272 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 CLRN3Q8NCR9 226 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 OR5M8Q8NGP6 311 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 OR1J2Q8NGS2 313 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 OR10Z1Q8NGY1 313 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 OTOSQ8NHW6 89 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 SEH1LQ96EE3 360 aa15.2■□□□□ 0.02
FOXA1-201ENST00000250448 SLC25A21Q9BQT8 299 aaPredicted RBP15.2■□□□□ 0.02
FOXA1-201ENST00000250448 TINAGL1Q9GZM7 467 aaPredicted RBP15.2■□□□□ 0.02
FOXA1-201ENST00000250448 NXF5Q9H1B4 397 aaKnown RBP15.2■□□□□ 0.02
FOXA1-201ENST00000250448 BARX1Q9HBU1 254 aaPredicted RBP15.2■□□□□ 0.02
FOXA1-201ENST00000250448 MRTO4Q9UKD2 239 aaKnown RBP15.2■□□□□ 0.02
FOXA1-201ENST00000250448 KANTRA0A1W2PQU2 76 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 PMS2P1A4D2B8 440 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 PRSS47A8MTI9 375 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 AMY2AP04746 511 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 DEFA5Q01523 94 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 FGL1Q08830 312 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF704Q6ZNC4 412 aaPredicted RBP15.19■□□□□ 0.02
FOXA1-201ENST00000250448 MOB3CQ70IA8 216 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 PM20D2Q8IYS1 436 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 ZSCAN1Q8NBB4 408 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 MARC2Q969Z3 335 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 KTI12Q96EK9 354 aaPredicted RBP15.19■□□□□ 0.02
FOXA1-201ENST00000250448 OR8B4Q96RC9 309 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 TMEM185BQ9H7F4 350 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 MYOZ1Q9NP98 299 aaPredicted RBP15.19■□□□□ 0.02
FOXA1-201ENST00000250448 SLC22A13Q9Y226 551 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 A0A1B0GTI1 187 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 CDX4O14627 284 aaPredicted RBP15.19■□□□□ 0.02
FOXA1-201ENST00000250448 RAD1O60671 282 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 STARP49675 285 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 SLC17A1Q14916 467 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 PLA2G2CQ5R387 149 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 ATPAF1Q5TC12 328 aaPredicted RBP15.19■□□□□ 0.02
FOXA1-201ENST00000250448 GLT8D1Q68CQ7 371 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 CBLN3Q6UW01 205 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 C16orf47Q6ZP98 133 aaPredicted RBP15.19■□□□□ 0.02
FOXA1-201ENST00000250448 TMEM17Q86X19 198 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 PLPP7Q8NBV4 271 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 PHOSPHO1Q8TCT1 267 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF721Q8TF20 911 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 WDR13Q9H1Z4 485 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 PCDHB16Q9NRJ7 776 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 TAS2R3Q9NYW6 316 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 GTF2A1LQ9UNN4 478 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 DMXL1Q9Y485 3027 aa15.19■□□□□ 0.02
FOXA1-201ENST00000250448 FAM74A7A6NL05 159 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 RAB3AP20336 220 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 LUMP51884 338 aaPredicted RBP15.18■□□□□ 0.02
FOXA1-201ENST00000250448 MC2RQ01718 297 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 MEP1BQ16820 701 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 HYAL4Q2M3T9 481 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 FAM74A3Q4VXF1 159 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 OTPQ5XKR4 325 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 JMJD6Q6NYC1 403 aaPredicted RBP15.18■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF627Q7L945 461 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 OR1J4Q8NGS1 313 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 SLC25A28Q96A46 364 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 NPAS1Q99742 590 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 GPN3Q9UHW5 284 aaPredicted RBP15.18■□□□□ 0.02
FOXA1-201ENST00000250448 OTOGLQ3ZCN5 2332 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 OR5H14A6NHG9 310 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 MPTX1A8MV57 137 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 SMAD9O15198 467 aaKnown RBP15.18■□□□□ 0.02
FOXA1-201ENST00000250448 BCL2L11O43521 198 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms