RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 C9orf170A2RU37 121 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ARPC3O15145 178 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 TCAPO15273 167 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 NDUFB2O95178 105 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 TXNDC12O95881 172 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 BGLAPP02818 100 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ASAH2BP0C7U1 165 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 BMP7P18075 431 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 MST1P26927 711 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 CDC42P60953 191 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 SNRPGP62308 76 aaKnown RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 SLC35A2P78381 396 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 PTGES3Q15185 160 aaKnown RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ZNF468Q5VIY5 522 aaPredicted RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 GFRALQ6UXV0 394 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ESPNLQ6ZVH7 1005 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 GHDCQ8N2G8 530 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 C12orf45Q8N5I9 185 aaPredicted RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 LRRC17Q8N6Y2 441 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 GATSQ8NAP1 163 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 OR5T1Q8NG75 326 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 OR5M3Q8NGP4 307 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 RNF31Q96EP0 1072 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 VRK1Q99986 396 aaPredicted RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 SF3B5Q9BWJ5 86 aaKnown RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 NXF2Q9GZY0 626 aaKnown RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 NUAK2Q9H093 628 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 DUSP21Q9H596 190 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ZDHHC11Q9H8X9 412 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 RNF122Q9H9V4 155 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ERRFI1Q9UJM3 462 aaPredicted RBP8.31□□□□□ -1.08
TGFB3-201ENST00000238682 ATRXP46100 2492 aa8.31□□□□□ -1.08
TGFB3-201ENST00000238682 TMEM72A0PK05 275 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 OR14I1A6ND48 311 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 A8MXK9 166 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 IGFBP1P08833 259 aaPredicted RBP8.3□□□□□ -1.08
TGFB3-201ENST00000238682 PCMT1P22061 227 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 MEOX1P50221 254 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
TGFB3-201ENST00000238682 FOXF1Q12946 379 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 CARTPTQ16568 116 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 ZNF404Q494X3 552 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 PRR30Q53SZ7 412 aaPredicted RBP8.3□□□□□ -1.08
TGFB3-201ENST00000238682 TMEM201Q5SNT2 666 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 AHSA2Q719I0 299 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 SLC46A3Q7Z3Q1 461 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 LNX2Q8N448 690 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 ASB5Q8WWX0 329 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 SIGLEC12Q96PQ1 595 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 PFDN5Q99471 154 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 POLDIP3Q9BY77 421 aaKnown RBP8.3□□□□□ -1.08
TGFB3-201ENST00000238682 SLIRPQ9GZT3 109 aaKnown RBP8.3□□□□□ -1.08
TGFB3-201ENST00000238682 MIXL1Q9H2W2 232 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 RASD1Q9Y272 281 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 SIGLEC7Q9Y286 467 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 A0A1B0GW55 424 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 PYCARD-AS1I3L0S3 204 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 ZIC3O60481 467 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 SOX14O95416 240 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 MT-ND2P03891 347 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 RAF1P04049 648 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 CLEC3BP05452 202 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DUX4L2P0CJ85 424 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DUX4L3P0CJ86 424 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DUX4L4P0CJ87 422 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DUX4L5P0CJ88 424 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DUX4L6P0CJ89 424 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DUX4L7P0CJ90 424 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 NUDT6P53370 316 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 B3GALT5-AS1P59052 145 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 HOXC5Q00444 222 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 MRPL49Q13405 166 aaKnown RBP8.3□□□□□ -1.08
TGFB3-201ENST00000238682 AQP6Q13520 282 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 NDUFAF6Q330K2 333 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 SYT14P1Q58G82 188 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 LIPNQ5VXI9 398 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 OR5M10Q6IEU7 315 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 WDR88Q6ZMY6 472 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 LINC00696Q6ZRV3 163 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 AMER2Q8N7J2 671 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 OR2T33Q8NG76 320 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 OR5J2Q8NH18 312 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 MCFD2Q8NI22 146 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DTD1Q8TEA8 209 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 TTTY12Q9BZ98 90 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 MEPEQ9NQ76 525 aaPredicted RBP8.3□□□□□ -1.08
TGFB3-201ENST00000238682 NANSQ9NR45 359 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 DUX4Q9UBX2 424 aa8.3□□□□□ -1.08
TGFB3-201ENST00000238682 A6NIZ1 184 aa8.29□□□□□ -1.08
TGFB3-201ENST00000238682 FTCDNL1E5RQL4 147 aa8.29□□□□□ -1.08
TGFB3-201ENST00000238682 AQP7O14520 342 aa8.29□□□□□ -1.08
TGFB3-201ENST00000238682 RGS10O43665 173 aa8.29□□□□□ -1.08
TGFB3-201ENST00000238682 DIRAS3O95661 229 aa8.29□□□□□ -1.08
TGFB3-201ENST00000238682 FADS2O95864 444 aaKnown RBP8.29□□□□□ -1.08
TGFB3-201ENST00000238682 CPN1P15169 458 aa8.29□□□□□ -1.08
TGFB3-201ENST00000238682 FUT1P19526 365 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms