RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PTDSS2Q9BVG9 487 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 ZNF142P52746 1687 aaPredicted RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 CHEK1O14757 476 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 SEMA4FO95754 770 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TMEM81Q6P7N7 255 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 ZNF429Q86V71 674 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 NUDT22Q9BRQ3 303 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 CXXC1Q9P0U4 656 aaPredicted RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 PRAMEF4O60810 478 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TUSC2O75896 110 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 BIDP55957 195 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 C12orf73Q69YU5 71 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 MRM1Q6IN84 353 aaKnown RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 CD300LDQ6UXZ3 194 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 ARHGDIGQ99819 225 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 ZNF2Q9BSG1 426 aaPredicted RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 FKRPQ9H9S5 495 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PPP1R14DQ9NXH3 145 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 FOXJ3Q9UPW0 622 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 HEPACAM2A8MVW5 462 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 RAC1P63000 192 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 SUMF1Q8NBK3 374 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TMEFF2Q9UIK5 374 aaPredicted RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 CRYBB2P43320 205 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PKIAP61925 76 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 ZNF628Q5EBL2 1059 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PARS2Q7L3T8 475 aaKnown RBP7.51□□□□□ -1.21
APOB-201ENST00000233242 RXFP4Q8TDU9 374 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PIGQQ9BRB3 760 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 CTDSP1Q9GZU7 261 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 BET1LQ9NYM9 111 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 OR8G2PQ6IF36 304 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 TMEM179BQ7Z7N9 219 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PLPP6Q8IY26 295 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PCED1AQ9H1Q7 454 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 HIF1ANQ9NWT6 349 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 C1SP09871 688 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 IL3RAP26951 378 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 SLC6A12P48065 614 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PRSS36Q5K4E3 855 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PTOV1Q86YD1 416 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 P2RY2P41231 377 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 BTLAQ7Z6A9 289 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 LRRTM1Q86UE6 522 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 RASD2Q96D21 266 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 SEC11CQ9BY50 192 aa7.51□□□□□ -1.21
APOB-201ENST00000233242 PRSS38A1L453 326 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ZNF98A6NK75 572 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 B4DEV8 164 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 GLSO94925 669 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 ADH4P08319 380 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 OR10J4P0C629 311 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 COX19Q49B96 90 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 SLC16A11Q8NCK7 471 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 GP1BAP07359 652 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 JMJD7P0C870 316 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 RPL34P49207 117 aaKnown RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 ZP2Q05996 745 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 RNF165Q6ZSG1 346 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 NLGN4YQ8NFZ3 816 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 OR2G2Q8NGZ5 317 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 FAM210BQ96KR6 192 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 PARP12Q9H0J9 701 aaKnown RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 BOKQ9UMX3 212 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 CICQ96RK0 1608 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 TARM1B6A8C7 271 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 PYCARD-AS1I3L0S3 204 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 NPPBP16860 134 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 CTRB1P17538 263 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 NTF3P20783 257 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 CTRB2Q6GPI1 263 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 OR5D18Q8NGL1 313 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 RPUSD4Q96CM3 377 aaKnown RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 TEX101Q9BY14 249 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 CHST6Q9GZX3 395 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 SIRT7Q9NRC8 400 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ZNF275Q9NSD4 429 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 ZNF107Q9UII5 783 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 NXT1Q9UKK6 140 aaKnown RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 FITM1A5D6W6 292 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ARHGAP11BQ3KRB8 267 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 TMEM40Q8WWA1 233 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 NXF2Q9GZY0 626 aaKnown RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 UCK1Q9HA47 277 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 MTFP1Q9UDX5 166 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 WSB1Q9Y6I7 421 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 R4GMQ9 66 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 TRIP11Q15643 1979 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 A0A087X0M5 115 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 A0A1B0GX30 115 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 FIGNL2A6NMB9 653 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 VAMP5O95183 116 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 FBP1P09467 338 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 WDR73Q6P4I2 378 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ZNF66Q6ZN08 573 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 TMEM130Q8N3G9 435 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 PGBD5Q8N414 524 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 OR10P1Q8NGE3 313 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 LCORQ96JN0 433 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 MS4A10Q96PG2 267 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms